RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 HUWE1Q7Z6Z7 4374 aaKnown RBP10.66□□□□□ -0.7
PTPN20-206ENST00000395722 K7EQD1 137 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 ATP5G1P05496 136 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 P0DMU3 169 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
PTPN20-206ENST00000395722 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 URB1-AS1Q96HZ7 61 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 Q9UF83 564 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
PTPN20-206ENST00000395722 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 NDUFA6P56556 154 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 NEXN-AS1Q8NBZ9 246 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.71
PTPN20-206ENST00000395722 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
PTPN20-206ENST00000395722 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
PTPN20-206ENST00000395722 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
PTPN20-206ENST00000395722 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 SERF1AO75920 110 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 ESDP10768 282 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 IFI27P40305 119 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-206ENST00000395722 RHOHQ15669 191 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 NIT1Q86X76 327 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 C11orf45Q8TAV5 145 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
PTPN20-206ENST00000395722 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
PTPN20-206ENST00000395722 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 S100A6P06703 90 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 CRYBA4P53673 196 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 Q8N8P6 123 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
PTPN20-206ENST00000395722 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 NUPR1O60356 82 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 PMCHP20382 165 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
PTPN20-206ENST00000395722 LINC00614P0C842 121 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 NANOS2P60321 138 aaKnown RBP10.61□□□□□ -0.71
PTPN20-206ENST00000395722 Q6ZTC4 211 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
PTPN20-206ENST00000395722 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
PTPN20-206ENST00000395722 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
PTPN20-206ENST00000395722 TNFRSF18Q9Y5U5 241 aa10.6□□□□□ -0.71
PTPN20-206ENST00000395722 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
PTPN20-206ENST00000395722 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 VCYO14598 125 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 SNRPEP62304 92 aaKnown RBP10.59□□□□□ -0.71
PTPN20-206ENST00000395722 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 F5H768 121 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 UBE2D3P61077 147 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 UBE2D2P62837 147 aa10.59□□□□□ -0.71
PTPN20-206ENST00000395722 RPL36AP83881 106 aaKnown RBP10.59□□□□□ -0.71
PTPN20-206ENST00000395722 RNASEKQ6P5S7 137 aaKnown RBP10.59□□□□□ -0.71
PTPN20-206ENST00000395722 RPL36ALQ969Q0 106 aaKnown RBP10.59□□□□□ -0.71
PTPN20-206ENST00000395722 K7EMI3 77 aa10.58□□□□□ -0.72
PTPN20-206ENST00000395722 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
PTPN20-206ENST00000395722 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
PTPN20-206ENST00000395722 PAX4O43316 350 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 I3L3M4 83 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 HTN3P15516 51 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 GAGE1Q13065 139 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 GAGE4Q13068 117 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 GAGE5Q13069 117 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 GAGE13Q4V321 117 aa10.57□□□□□ -0.72
PTPN20-206ENST00000395722 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 TSHBP01222 138 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 GYPEP15421 78 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 FBN3Q75N90 2809 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 H3BNG1 76 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 HSBP1O75506 76 aa10.56□□□□□ -0.72
PTPN20-206ENST00000395722 TCAPO15273 167 aa10.55□□□□□ -0.72
PTPN20-206ENST00000395722 LAGE3Q14657 143 aa10.55□□□□□ -0.72
PTPN20-206ENST00000395722 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
PTPN20-206ENST00000395722 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
PTPN20-206ENST00000395722 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
PTPN20-206ENST00000395722 A0A096LNJ9 63 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 TRAV10A0A0B4J240 114 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 IFITM10A6NMD0 228 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 PACRGQ96M98 296 aaPredicted RBP10.54□□□□□ -0.72
PTPN20-206ENST00000395722 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 A0A0J9YY99 117 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 ORMDL2Q53FV1 153 aa10.54□□□□□ -0.72
PTPN20-206ENST00000395722 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
PTPN20-206ENST00000395722 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
PTPN20-206ENST00000395722 PHLDA1Q8WV24 401 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms