RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 HIGD1BQ9P298 99 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 NF1P21359 2839 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 VCYO14598 125 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 CRYGDP07320 174 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 ZFP2Q6ZN57 461 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 DLX4Q92988 240 aaPredicted RBP11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 CHAC1Q9BUX1 264 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
RAPGEF3-203ENST00000395360 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
RAPGEF3-203ENST00000395360 MAPKAPK5-AS1Q8N8E1 139 aa11.41□□□□□ -0.58
RAPGEF3-203ENST00000395360 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
RAPGEF3-203ENST00000395360 H3BRM9 83 aa11.4□□□□□ -0.58
RAPGEF3-203ENST00000395360 M0QY20 66 aa11.4□□□□□ -0.58
RAPGEF3-203ENST00000395360 GCSHP23434 173 aa11.4□□□□□ -0.58
RAPGEF3-203ENST00000395360 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 RIPPLY3P57055 190 aa11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 RPL39P62891 51 aaKnown RBP11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 Q6ZSV7 163 aa11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.59
RAPGEF3-203ENST00000395360 WNK1Q9H4A3 2382 aa11.39□□□□□ -0.59
RAPGEF3-203ENST00000395360 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
RAPGEF3-203ENST00000395360 H3BMM0 161 aa11.39□□□□□ -0.59
RAPGEF3-203ENST00000395360 TSHBP01222 138 aa11.39□□□□□ -0.59
RAPGEF3-203ENST00000395360 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
RAPGEF3-203ENST00000395360 FXYD2P54710 66 aa11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 MORN3Q6PF18 240 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 C9orf118A6NHY6 69 aa11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 NAA38Q9BRA0 125 aaKnown RBP11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 NIPBLQ6KC79 2804 aaeCLIP11.38□□□□□ -0.59
RAPGEF3-203ENST00000395360 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 H3BUT2 72 aa11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 PRM2P04554 102 aa11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
RAPGEF3-203ENST00000395360 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 TRPT1Q86TN4 253 aaKnown RBP11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 MAP6D1Q9H9H5 199 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 SETD2Q9BYW2 2564 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 JMJD1CQ15652 2540 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 NDUFA7O95182 113 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 CD300EQ496F6 205 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-203ENST00000395360 A8MTW9 85 aa11.35□□□□□ -0.59
RAPGEF3-203ENST00000395360 EMP1P54849 157 aa11.35□□□□□ -0.59
RAPGEF3-203ENST00000395360 CEND1Q8N111 149 aa11.35□□□□□ -0.59
RAPGEF3-203ENST00000395360 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
RAPGEF3-203ENST00000395360 GAGE10A6NGK3 116 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 PMVKQ15126 192 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 IGLV4-69A0A075B6H9 119 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 MYMXA0A1B0GTQ4 84 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 A0A1W2PRX2 142 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 E9PLD3 99 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
RAPGEF3-203ENST00000395360 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
RAPGEF3-203ENST00000395360 C11orf86A6NJI1 115 aa11.33□□□□□ -0.6
RAPGEF3-203ENST00000395360 RAX2Q96IS3 184 aa11.33□□□□□ -0.6
RAPGEF3-203ENST00000395360 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
RAPGEF3-203ENST00000395360 K7ERJ3 54 aa11.32□□□□□ -0.6
RAPGEF3-203ENST00000395360 NHP2Q9NX24 153 aaKnown RBP11.32□□□□□ -0.6
RAPGEF3-203ENST00000395360 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
RAPGEF3-203ENST00000395360 HIST1H4GQ99525 98 aa11.32□□□□□ -0.6
RAPGEF3-203ENST00000395360 I3L3M4 83 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 SAP30O75446 220 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 P0DMU3 169 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 PROK1P58294 105 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 G3V4G9 280 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 RHOHQ15669 191 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 LINC01587Q99440 93 aa11.31□□□□□ -0.6
RAPGEF3-203ENST00000395360 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 CD28P10747 220 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 TAL2Q16559 108 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 GTF2H5Q6ZYL4 71 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 M0R2P5 195 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
RAPGEF3-203ENST00000395360 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms