RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 IGKCP01834 107 aa10.99□□□□□ -0.65
GPC3-202ENST00000394299 RPL39P62891 51 aaKnown RBP10.99□□□□□ -0.65
GPC3-202ENST00000394299 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
GPC3-202ENST00000394299 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
GPC3-202ENST00000394299 COTL1Q14019 142 aa10.99□□□□□ -0.65
GPC3-202ENST00000394299 ZFP2Q6ZN57 461 aa10.98□□□□□ -0.65
GPC3-202ENST00000394299 STHQ8IWL8 128 aa10.98□□□□□ -0.65
GPC3-202ENST00000394299 A0A087WX48 190 aa10.98□□□□□ -0.65
GPC3-202ENST00000394299 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
GPC3-202ENST00000394299 PPP1R17O96001 155 aa10.98□□□□□ -0.65
GPC3-202ENST00000394299 C2CD3Q4AC94 2353 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 DPM2O94777 84 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 Q6ZSN1 163 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 VWFP04275 2813 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 VCYO14598 125 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 SCGB2A2Q13296 93 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 TP53TG1Q9Y2A0 90 aa10.97□□□□□ -0.65
GPC3-202ENST00000394299 TSHBP01222 138 aa10.96□□□□□ -0.65
GPC3-202ENST00000394299 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
GPC3-202ENST00000394299 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
GPC3-202ENST00000394299 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.65
GPC3-202ENST00000394299 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
GPC3-202ENST00000394299 MRPL16Q9NX20 251 aaKnown RBP10.96□□□□□ -0.65
GPC3-202ENST00000394299 BVES-AS1Q5T3Y7 98 aa10.96□□□□□ -0.66
GPC3-202ENST00000394299 NEXN-AS1Q8NBZ9 246 aa10.96□□□□□ -0.66
GPC3-202ENST00000394299 ORAOV1Q8WV07 137 aa10.96□□□□□ -0.66
GPC3-202ENST00000394299 NSD1Q96L73 2696 aaPredicted RBP10.95□□□□□ -0.66
GPC3-202ENST00000394299 INSP01308 110 aa10.95□□□□□ -0.66
GPC3-202ENST00000394299 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
GPC3-202ENST00000394299 NDUFA7O95182 113 aa10.95□□□□□ -0.66
GPC3-202ENST00000394299 ERASQ7Z444 233 aa10.95□□□□□ -0.66
GPC3-202ENST00000394299 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
GPC3-202ENST00000394299 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
GPC3-202ENST00000394299 TRBV6-5A0A0K0K1A5 114 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 M0R2P5 195 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 EMP1P54849 157 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
GPC3-202ENST00000394299 CHTOPQ9Y3Y2 248 aaKnown RBP10.94□□□□□ -0.66
GPC3-202ENST00000394299 K7EMI3 77 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 SPATA3Q8NHX4 192 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 NACAE9PAV3 2078 aa10.94□□□□□ -0.66
GPC3-202ENST00000394299 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 H7C1H1 209 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 K7EP13 123 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 IGLV1-51P01701 117 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 RPL35AP18077 110 aaKnown RBP10.93□□□□□ -0.66
GPC3-202ENST00000394299 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
GPC3-202ENST00000394299 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 CYSLTR1Q9Y271 337 aa10.93□□□□□ -0.66
GPC3-202ENST00000394299 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 F8VRH5 84 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 UBE2V1Q13404 147 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
GPC3-202ENST00000394299 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
GPC3-202ENST00000394299 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
GPC3-202ENST00000394299 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
GPC3-202ENST00000394299 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
GPC3-202ENST00000394299 COX11Q9Y6N1 276 aa10.9□□□□□ -0.66
GPC3-202ENST00000394299 C12orf54Q6X4T0 127 aa10.9□□□□□ -0.66
GPC3-202ENST00000394299 JMJD8Q96S16 334 aa10.9□□□□□ -0.66
GPC3-202ENST00000394299 TMEM97Q5BJF2 176 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 TRRAPQ9Y4A5 3859 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 A8MWV9 139 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 PLNP26678 52 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
GPC3-202ENST00000394299 I3L3M4 83 aa10.88□□□□□ -0.67
GPC3-202ENST00000394299 BEAN1Q3B7T3 259 aa10.88□□□□□ -0.67
GPC3-202ENST00000394299 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
GPC3-202ENST00000394299 IGHV3-38A0A0C4DH36 116 aa10.88□□□□□ -0.67
GPC3-202ENST00000394299 PF4P02776 101 aa10.88□□□□□ -0.67
GPC3-202ENST00000394299 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 TAX1BP3O14907 124 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 IGHV3-53P01767 116 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 FLNBO75369 2602 aaKnown RBP10.87□□□□□ -0.67
GPC3-202ENST00000394299 IGLV4-69A0A075B6H9 119 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
GPC3-202ENST00000394299 Q6ZTI0 123 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
GPC3-202ENST00000394299 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
GPC3-202ENST00000394299 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
GPC3-202ENST00000394299 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
GPC3-202ENST00000394299 NDUFA11Q86Y39 141 aa10.86□□□□□ -0.67
GPC3-202ENST00000394299 C20orf203Q8NBC4 194 aa10.86□□□□□ -0.67
GPC3-202ENST00000394299 SPXQ9BT56 116 aa10.86□□□□□ -0.67
GPC3-202ENST00000394299 PMVKQ15126 192 aa10.85□□□□□ -0.67
GPC3-202ENST00000394299 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
GPC3-202ENST00000394299 ATRQ13535 2644 aa10.85□□□□□ -0.67
GPC3-202ENST00000394299 LINC00482Q8N8I6 264 aa10.85□□□□□ -0.67
GPC3-202ENST00000394299 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
GPC3-202ENST00000394299 SIVA1O15304 175 aa10.84□□□□□ -0.67
GPC3-202ENST00000394299 RS1O15537 224 aa10.84□□□□□ -0.67
GPC3-202ENST00000394299 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms