RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 WFDC12Q8WWY7 111 aa17.49■□□□□ 0.39
PICALM-202ENST00000393346 TMEM141Q96I45 108 aa17.49■□□□□ 0.39
PICALM-202ENST00000393346 A0A087WWL8 130 aa17.49■□□□□ 0.39
PICALM-202ENST00000393346 C11orf86A6NJI1 115 aa17.49■□□□□ 0.39
PICALM-202ENST00000393346 F5H697 171 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 SCGB1D4Q6XE38 83 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 Q8N2B8 174 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 ODF3Q96PU9 254 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 NSD1Q96L73 2696 aaPredicted RBP17.48■□□□□ 0.39
PICALM-202ENST00000393346 TMEM89A2RUT3 159 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 LGALS9O00182 355 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 CD300EQ496F6 205 aaPredicted RBP17.48■□□□□ 0.39
PICALM-202ENST00000393346 PLEKHB2Q96CS7 222 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 TIMM17AQ99595 171 aa17.48■□□□□ 0.39
PICALM-202ENST00000393346 SPANXB1Q9NS25 103 aaPredicted RBP17.48■□□□□ 0.39
PICALM-202ENST00000393346 TMEM238LA0A1B0GVL6 79 aa17.47■□□□□ 0.39
PICALM-202ENST00000393346 A6NJY4 79 aa17.47■□□□□ 0.39
PICALM-202ENST00000393346 MORN3Q6PF18 240 aaPredicted RBP17.47■□□□□ 0.39
PICALM-202ENST00000393346 TRBV6-5A0A0K0K1A5 114 aa17.47■□□□□ 0.39
PICALM-202ENST00000393346 SDHAF1A6NFY7 115 aa17.47■□□□□ 0.39
PICALM-202ENST00000393346 HERVK_113P61574 105 aa17.47■□□□□ 0.39
PICALM-202ENST00000393346 TRBV27A0A0K0K1C4 114 aa17.46■□□□□ 0.39
PICALM-202ENST00000393346 LY6G6DO95868 133 aa17.46■□□□□ 0.39
PICALM-202ENST00000393346 RPL39P62891 51 aaKnown RBP17.46■□□□□ 0.39
PICALM-202ENST00000393346 AMTNQ6UX39 209 aa17.46■□□□□ 0.39
PICALM-202ENST00000393346 C9orf85Q96MD7 179 aa17.46■□□□□ 0.39
PICALM-202ENST00000393346 ELANEP08246 267 aa17.46■□□□□ 0.38
PICALM-202ENST00000393346 KLHL30-AS1Q8NEE0 82 aa17.46■□□□□ 0.38
PICALM-202ENST00000393346 IGHV3-16A0A0C4DH30 117 aa17.45■□□□□ 0.38
PICALM-202ENST00000393346 GAGE13Q4V321 117 aa17.45■□□□□ 0.38
PICALM-202ENST00000393346 SRSF9Q13242 221 aaKnown RBP eCLIP17.44■□□□□ 0.38
PICALM-202ENST00000393346 Q6ZSV7 163 aa17.44■□□□□ 0.38
PICALM-202ENST00000393346 SETXQ7Z333 2677 aaKnown RBP17.44■□□□□ 0.38
PICALM-202ENST00000393346 ZNF688P0C7X2 276 aa17.44■□□□□ 0.38
PICALM-202ENST00000393346 DEFB104AQ8WTQ1 72 aa17.44■□□□□ 0.38
PICALM-202ENST00000393346 A0A0J9YX75 114 aa17.43■□□□□ 0.38
PICALM-202ENST00000393346 PGPEP1Q9NXJ5 209 aa17.43■□□□□ 0.38
PICALM-202ENST00000393346 UBE2D1P51668 147 aa17.43■□□□□ 0.38
PICALM-202ENST00000393346 EMP1P54849 157 aa17.43■□□□□ 0.38
PICALM-202ENST00000393346 PRO0461Q9UI25 63 aa17.43■□□□□ 0.38
PICALM-202ENST00000393346 SYT8Q8NBV8 401 aa17.42■□□□□ 0.38
PICALM-202ENST00000393346 SNRPD3P62318 126 aaKnown RBP17.42■□□□□ 0.38
PICALM-202ENST00000393346 FAM74A4Q5TZK3 123 aa17.42■□□□□ 0.38
PICALM-202ENST00000393346 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
PICALM-202ENST00000393346 J3QR89 54 aa17.41■□□□□ 0.38
PICALM-202ENST00000393346 UBE2E2Q96LR5 201 aa17.41■□□□□ 0.38
PICALM-202ENST00000393346 MRPL16Q9NX20 251 aaKnown RBP17.41■□□□□ 0.38
PICALM-202ENST00000393346 A0A0J9YY99 117 aa17.41■□□□□ 0.38
PICALM-202ENST00000393346 ZNF876PQ49A33 203 aa17.41■□□□□ 0.38
PICALM-202ENST00000393346 WNK1Q9H4A3 2382 aa17.4■□□□□ 0.38
PICALM-202ENST00000393346 TRAV12-2A0A075B6T6 113 aa17.4■□□□□ 0.38
PICALM-202ENST00000393346 ETDBQ3ZM63 59 aa17.4■□□□□ 0.38
PICALM-202ENST00000393346 K7EQG2 157 aa17.39■□□□□ 0.38
PICALM-202ENST00000393346 M0QY20 66 aa17.39■□□□□ 0.38
PICALM-202ENST00000393346 SH2D6Q7Z4S9 175 aa17.39■□□□□ 0.38
PICALM-202ENST00000393346 Q8N1Y9 231 aa17.39■□□□□ 0.38
PICALM-202ENST00000393346 RNF152Q8N8N0 203 aa17.39■□□□□ 0.38
PICALM-202ENST00000393346 ZNF418Q8TF45 676 aaPredicted RBP17.39■□□□□ 0.38
PICALM-202ENST00000393346 IGKV3-20P01619 116 aa17.39■□□□□ 0.37
PICALM-202ENST00000393346 ZNF56Q15929 161 aa17.38■□□□□ 0.37
PICALM-202ENST00000393346 ZNRF2Q8NHG8 242 aa17.38■□□□□ 0.37
PICALM-202ENST00000393346 ZNF256Q9Y2P7 627 aaPredicted RBP17.38■□□□□ 0.37
PICALM-202ENST00000393346 IGHV1OR15-1A0A075B7D0 117 aa17.38■□□□□ 0.37
PICALM-202ENST00000393346 TMEM170BQ5T4T1 132 aa17.38■□□□□ 0.37
PICALM-202ENST00000393346 TMEM238C9JI98 176 aa17.37■□□□□ 0.37
PICALM-202ENST00000393346 RHOHQ15669 191 aa17.37■□□□□ 0.37
PICALM-202ENST00000393346 NSUN5P1Q3KNT7 163 aa17.37■□□□□ 0.37
PICALM-202ENST00000393346 KHDC1LQ5JSQ8 128 aa17.37■□□□□ 0.37
PICALM-202ENST00000393346 RNASE1P07998 156 aaKnown RBP17.36■□□□□ 0.37
PICALM-202ENST00000393346 HIST2H2BDQ6DRA6 164 aa17.36■□□□□ 0.37
PICALM-202ENST00000393346 C18orf65Q6ZTR6 163 aa17.36■□□□□ 0.37
PICALM-202ENST00000393346 TRPT1Q86TN4 253 aaKnown RBP17.36■□□□□ 0.37
PICALM-202ENST00000393346 BAHCC1Q9P281 2608 aa17.36■□□□□ 0.37
PICALM-202ENST00000393346 NIPBLQ6KC79 2804 aaeCLIP17.36■□□□□ 0.376e-6■□□□□ 9
PICALM-202ENST00000393346 TSPEAR-AS2P59090 65 aa17.36■□□□□ 0.37
PICALM-202ENST00000393346 MTURNQ8N3F0 131 aa17.36■□□□□ 0.37
PICALM-202ENST00000393346 SPAG8Q99932 426 aaPredicted RBP17.36■□□□□ 0.37
PICALM-202ENST00000393346 FN1P02751 2386 aaKnown RBP17.35■□□□□ 0.37
PICALM-202ENST00000393346 TSPAN13O95857 204 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 HILS1P60008 231 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 SPINK13Q1W4C9 94 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 TCTEX1D4Q5JR98 221 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 DEFB136Q30KP8 78 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 NFE4Q86UQ8 179 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 SLC25A29Q8N8R3 303 aa17.35■□□□□ 0.37
PICALM-202ENST00000393346 DLX4Q92988 240 aaPredicted RBP17.35■□□□□ 0.37
PICALM-202ENST00000393346 TSSC4Q9Y5U2 329 aaPredicted RBP17.35■□□□□ 0.37
PICALM-202ENST00000393346 INAFM1C9JVW0 142 aa17.33■□□□□ 0.37
PICALM-202ENST00000393346 GAGE12HA6NDE8 117 aa17.33■□□□□ 0.36
PICALM-202ENST00000393346 IGHV3-30P01768 117 aa17.33■□□□□ 0.36
PICALM-202ENST00000393346 IGHV3-30-5P0DP03 117 aa17.33■□□□□ 0.36
PICALM-202ENST00000393346 NDUFA11Q86Y39 141 aa17.33■□□□□ 0.36
PICALM-202ENST00000393346 J3QQQ9 107 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 APOMO95445 188 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 SYNJ2BPP57105 145 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 AMELXQ99217 191 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 SIGMAR1Q99720 223 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 F8P00451 2351 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 P0DMU3 169 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 FAM231AP0DMU4 169 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms