RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
MKS1-202ENST00000393119 C19orf73Q9NVV2 129 aa10.94□□□□□ -0.66
MKS1-202ENST00000393119 A8MTW9 85 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 AZU1P20160 251 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 CACNG7P62955 275 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 FAM74A4Q5TZK3 123 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 STHQ8IWL8 128 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 NRACQ8N912 160 aa10.93□□□□□ -0.66
MKS1-202ENST00000393119 NAA38Q9BRA0 125 aaKnown RBP10.93□□□□□ -0.66
MKS1-202ENST00000393119 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
MKS1-202ENST00000393119 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
MKS1-202ENST00000393119 NBEAL2Q6ZNJ1 2754 aa10.92□□□□□ -0.66
MKS1-202ENST00000393119 LINC00315P59091 139 aa10.92□□□□□ -0.66
MKS1-202ENST00000393119 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
MKS1-202ENST00000393119 IGHV3-73A0A0B4J1V6 119 aa10.91□□□□□ -0.66
MKS1-202ENST00000393119 LINC01587Q99440 93 aa10.91□□□□□ -0.66
MKS1-202ENST00000393119 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
MKS1-202ENST00000393119 TRPT1Q86TN4 253 aaKnown RBP10.91□□□□□ -0.66
MKS1-202ENST00000393119 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
MKS1-202ENST00000393119 RASL10AQ92737 203 aa10.91□□□□□ -0.66
MKS1-202ENST00000393119 GIG44P09565 113 aaPredicted RBP10.9□□□□□ -0.66
MKS1-202ENST00000393119 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.66
MKS1-202ENST00000393119 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
MKS1-202ENST00000393119 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
MKS1-202ENST00000393119 PCP2Q8IVA1 136 aa10.9□□□□□ -0.66
MKS1-202ENST00000393119 CITED1Q99966 193 aa10.9□□□□□ -0.66
MKS1-202ENST00000393119 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 SVIPQ8NHG7 77 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 KRTAP24-1Q3LI83 254 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 C18orf15Q96N68 181 aa10.89□□□□□ -0.67
MKS1-202ENST00000393119 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 NXPH4O95158 308 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 Q9UF83 564 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 IGLV2-18A0A075B6J9 118 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 LINC01546A6NGU7 62 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 F5H697 171 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 HBDP02042 147 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 FABP2P12104 132 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 MAP1LC3AQ9H492 121 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 ZMAT4Q9H898 229 aa10.88□□□□□ -0.67
MKS1-202ENST00000393119 MAST4O15021 2626 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 PKD1L1Q8TDX9 2849 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 SAMD5Q5TGI4 173 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 RAB37Q96AX2 223 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 CRYGDP07320 174 aa10.87□□□□□ -0.67
MKS1-202ENST00000393119 CMYA5Q8N3K9 4069 aa10.86□□□□□ -0.67
MKS1-202ENST00000393119 FXYD2P54710 66 aa10.86□□□□□ -0.67
MKS1-202ENST00000393119 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
MKS1-202ENST00000393119 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
MKS1-202ENST00000393119 INSP01308 110 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 P0DMU3 169 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 PRIMA1Q86XR5 153 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
MKS1-202ENST00000393119 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 Q6ZSN1 163 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 ANK2Q01484 3957 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 TRGV11A0A075B6L2 103 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
MKS1-202ENST00000393119 TM2D2Q9BX73 214 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
MKS1-202ENST00000393119 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
MKS1-202ENST00000393119 IGKV2D-26A0A0A0MRZ7 120 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 ZNF56Q15929 161 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 TMEM158Q8WZ71 300 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 E9PLD3 99 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 Q8N8P6 123 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 MRAP2Q96G30 205 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 SIGMAR1Q99720 223 aa10.83□□□□□ -0.68
MKS1-202ENST00000393119 NMUP48645 174 aa10.82□□□□□ -0.68
MKS1-202ENST00000393119 TCTAP57738 103 aa10.82□□□□□ -0.68
MKS1-202ENST00000393119 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
MKS1-202ENST00000393119 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
MKS1-202ENST00000393119 ODF1Q14990 250 aa10.82□□□□□ -0.68
MKS1-202ENST00000393119 CHAC1Q9BUX1 264 aa10.81□□□□□ -0.68
MKS1-202ENST00000393119 SYT8Q8NBV8 401 aa10.81□□□□□ -0.68
MKS1-202ENST00000393119 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
MKS1-202ENST00000393119 GTSF1LQ9H1H1 148 aa10.81□□□□□ -0.68
MKS1-202ENST00000393119 COL6A5A8TX70 2615 aa10.81□□□□□ -0.68
MKS1-202ENST00000393119 GAGE12HA6NDE8 117 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 F8W1H4 67 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 POM121L12Q8N7R1 296 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 NXT2Q9NPJ8 142 aaKnown RBP10.8□□□□□ -0.68
MKS1-202ENST00000393119 K7ERJ3 54 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 M0QY20 66 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 CSNK1G2-AS1Q8NCQ2 148 aa10.8□□□□□ -0.68
MKS1-202ENST00000393119 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 IGHV3-53P01767 116 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 GCSHP23434 173 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 M0R2P5 195 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 ZNF415Q09FC8 603 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms