RNA–Protein interactions for RNA: ENST00000392900.3

TCAF1-202, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 2,513 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-202ENST00000392900 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
TCAF1-202ENST00000392900 HOXA3O43365 443 aaPredicted RBP9.47□□□□□ -0.89
TCAF1-202ENST00000392900 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
TCAF1-202ENST00000392900 NIPBLQ6KC79 2804 aaeCLIP9.47□□□□□ -0.89
TCAF1-202ENST00000392900 DEFB136Q30KP8 78 aa9.47□□□□□ -0.89
TCAF1-202ENST00000392900 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
TCAF1-202ENST00000392900 MAST4O15021 2626 aa9.46□□□□□ -0.89
TCAF1-202ENST00000392900 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.89
TCAF1-202ENST00000392900 K7EMI3 77 aa9.46□□□□□ -0.89
TCAF1-202ENST00000392900 MED14OSP0DP75 135 aa9.46□□□□□ -0.89
TCAF1-202ENST00000392900 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.89
TCAF1-202ENST00000392900 ZNF580Q9UK33 172 aa9.46□□□□□ -0.89
TCAF1-202ENST00000392900 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
TCAF1-202ENST00000392900 SMIM13P0DJ93 91 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 LINC00315P59091 139 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 ORMDL2Q53FV1 153 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 MDFICQ9P1T7 246 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.9
TCAF1-202ENST00000392900 TRBV25-1A0A075B6N4 114 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 GCSHP23434 173 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
TCAF1-202ENST00000392900 FHL3Q13643 280 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 A0A0J9YX75 114 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 F5H697 171 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 J3QLI3 93 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 FXYD2P54710 66 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 SNRPD3P62318 126 aaKnown RBP9.45□□□□□ -0.9
TCAF1-202ENST00000392900 CHAC1Q9BUX1 264 aa9.45□□□□□ -0.9
TCAF1-202ENST00000392900 CCDC179H3BU77 68 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 K7EQG2 157 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
TCAF1-202ENST00000392900 SUMO4Q6EEV6 95 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 Q6YL49 198 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE7O76087 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 NXPH4O95158 308 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE4Q13068 117 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
TCAF1-202ENST00000392900 F8VRH5 84 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 SLURP1P55000 103 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 Q8N1Y9 231 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 BAALCQ8WXS3 180 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 F8P00451 2351 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 H3BMG7 143 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
TCAF1-202ENST00000392900 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 PRO0461Q9UI25 63 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 WNK1Q9H4A3 2382 aa9.43□□□□□ -0.9
TCAF1-202ENST00000392900 TRAV25A0A0B4J276 109 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 PRSS29PA6NIE9 313 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 H7C1H1 209 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 K7ERJ3 54 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 FOXI1Q12951 378 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 VCX2Q9H322 139 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
TCAF1-202ENST00000392900 IGHV3-16A0A0C4DH30 117 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 APOMO95445 188 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 FSHBP01225 129 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 HTN1P15515 57 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 PLNP26678 52 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 EMP1P54849 157 aa9.42□□□□□ -0.9
TCAF1-202ENST00000392900 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 ELANEP08246 267 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
TCAF1-202ENST00000392900 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 PTH2Q96A98 100 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
TCAF1-202ENST00000392900 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
TCAF1-202ENST00000392900 HIVEP2P31629 2446 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 E9PLD3 99 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 ZNF56Q15929 161 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 TEX29Q8N6K0 151 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
TCAF1-202ENST00000392900 SETD2Q9BYW2 2564 aaPredicted RBP9.4□□□□□ -0.9
TCAF1-202ENST00000392900 A0A1B0GWB2 263 aa9.4□□□□□ -0.91
TCAF1-202ENST00000392900 SDHAF1A6NFY7 115 aa9.4□□□□□ -0.91
TCAF1-202ENST00000392900 PRM2P04554 102 aa9.4□□□□□ -0.91
TCAF1-202ENST00000392900 C9orf85Q96MD7 179 aa9.4□□□□□ -0.91
TCAF1-202ENST00000392900 ZNF256Q9Y2P7 627 aaPredicted RBP9.4□□□□□ -0.91
TCAF1-202ENST00000392900 FN1P02751 2386 aaKnown RBP9.4□□□□□ -0.91
TCAF1-202ENST00000392900 IGHV1OR15-1A0A075B7D0 117 aa9.39□□□□□ -0.91
TCAF1-202ENST00000392900 TSHBP01222 138 aa9.39□□□□□ -0.91
TCAF1-202ENST00000392900 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms