RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF415Q09FC8 603 aa18.7■□□□□ 0.58
SMARCD3-203ENST00000392811 LINC01587Q99440 93 aa18.7■□□□□ 0.58
SMARCD3-203ENST00000392811 HIGD1BQ9P298 99 aa18.7■□□□□ 0.58
SMARCD3-203ENST00000392811 SCGB2A2Q13296 93 aa18.69■□□□□ 0.58
SMARCD3-203ENST00000392811 M0R2P5 195 aa18.69■□□□□ 0.58
SMARCD3-203ENST00000392811 INSP01308 110 aa18.69■□□□□ 0.58
SMARCD3-203ENST00000392811 MAPKAPK5-AS1Q8N8E1 139 aa18.68■□□□□ 0.58
SMARCD3-203ENST00000392811 CLUHP3Q96NS8 147 aa18.68■□□□□ 0.58
SMARCD3-203ENST00000392811 LINC00467Q9BRT7 94 aa18.68■□□□□ 0.58
SMARCD3-203ENST00000392811 TRBV25-1A0A075B6N4 114 aa18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 IGHV3-73A0A0B4J1V6 119 aa18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 TRAV8-6A0A0B4J262 113 aa18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 ZNF418Q8TF45 676 aaPredicted RBP18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 TMEM141Q96I45 108 aa18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 WNK1Q9H4A3 2382 aa18.67■□□□□ 0.58
SMARCD3-203ENST00000392811 HILS1P60008 231 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 C11orf72Q8NBR9 251 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 TIMM17AQ99595 171 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 CHAC1Q9BUX1 264 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 CCL25O15444 150 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 PROK1P58294 105 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 UBE2V1Q13404 147 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 RHOHQ15669 191 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 NSUN5P1Q3KNT7 163 aa18.66■□□□□ 0.58
SMARCD3-203ENST00000392811 A8MWV9 139 aa18.65■□□□□ 0.58
SMARCD3-203ENST00000392811 UFSP1Q6NVU6 142 aa18.65■□□□□ 0.58
SMARCD3-203ENST00000392811 STHQ8IWL8 128 aa18.65■□□□□ 0.58
SMARCD3-203ENST00000392811 EDA2RQ9HAV5 297 aa18.65■□□□□ 0.58
SMARCD3-203ENST00000392811 XCL2Q9UBD3 114 aa18.65■□□□□ 0.58
SMARCD3-203ENST00000392811 MTORP42345 2549 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 A6NDN8 102 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 OR11H12B2RN74 326 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 PTTG1IPP53801 180 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 PIK3CD-AS1Q5SR53 167 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 SMR3AQ99954 134 aa18.64■□□□□ 0.58
SMARCD3-203ENST00000392811 I3L3M4 83 aa18.64■□□□□ 0.57
SMARCD3-203ENST00000392811 PMVKQ15126 192 aa18.64■□□□□ 0.57
SMARCD3-203ENST00000392811 VAMP3Q15836 100 aa18.64■□□□□ 0.57
SMARCD3-203ENST00000392811 PTH2Q96A98 100 aa18.64■□□□□ 0.57
SMARCD3-203ENST00000392811 P0DMU3 169 aa18.63■□□□□ 0.57
SMARCD3-203ENST00000392811 FAM231AP0DMU4 169 aa18.63■□□□□ 0.57
SMARCD3-203ENST00000392811 FAM231CP0DMU5 169 aa18.63■□□□□ 0.57
SMARCD3-203ENST00000392811 CST9LQ9H4G1 147 aa18.62■□□□□ 0.57
SMARCD3-203ENST00000392811 IGLV4-69A0A075B6H9 119 aa18.62■□□□□ 0.57
SMARCD3-203ENST00000392811 OR11H2Q8NH07 326 aa18.61■□□□□ 0.57
SMARCD3-203ENST00000392811 CFAP126Q5VTH2 177 aa18.61■□□□□ 0.57
SMARCD3-203ENST00000392811 SPXQ9BT56 116 aa18.6■□□□□ 0.57
SMARCD3-203ENST00000392811 NACAE9PAV3 2078 aa18.6■□□□□ 0.57
SMARCD3-203ENST00000392811 SETD2Q9BYW2 2564 aaPredicted RBP18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 C11orf86A6NJI1 115 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 E9PLD3 99 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 SAP30O75446 220 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 GCSHP23434 173 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 EMP1P54849 157 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 C20orf203Q8NBC4 194 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 MRPL16Q9NX20 251 aaKnown RBP18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 FASNP49327 2511 aaKnown RBP18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 H3BRM9 83 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 Q6ZSN1 163 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 C1orf158Q8N1D5 194 aa18.59■□□□□ 0.57
SMARCD3-203ENST00000392811 ADARB2-AS1A8MUL3 147 aa18.58■□□□□ 0.56
SMARCD3-203ENST00000392811 NDUFA7O95182 113 aa18.58■□□□□ 0.56
SMARCD3-203ENST00000392811 AZU1P20160 251 aa18.58■□□□□ 0.56
SMARCD3-203ENST00000392811 PRADC1Q9BSG0 188 aa18.57■□□□□ 0.56
SMARCD3-203ENST00000392811 FXYD2P54710 66 aa18.57■□□□□ 0.56
SMARCD3-203ENST00000392811 BEAN1Q3B7T3 259 aa18.57■□□□□ 0.56
SMARCD3-203ENST00000392811 PAPPA-AS1Q5QFB9 102 aa18.57■□□□□ 0.56
SMARCD3-203ENST00000392811 AMMECR1LQ6DCA0 310 aa18.57■□□□□ 0.56
SMARCD3-203ENST00000392811 IGHV3OR16-12A0A075B7B8 117 aa18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 MYMXA0A1B0GTQ4 84 aa18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 K7EP13 123 aa18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 OPRPNQ99935 248 aaPredicted RBP18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 Q9UF83 564 aa18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 TNFRSF18Q9Y5U5 241 aa18.56■□□□□ 0.56
SMARCD3-203ENST00000392811 GCN1Q92616 2671 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-203ENST00000392811 C9orf118A6NHY6 69 aa18.54■□□□□ 0.56
SMARCD3-203ENST00000392811 RHODO00212 210 aa18.54■□□□□ 0.56
SMARCD3-203ENST00000392811 CEND1Q8N111 149 aa18.54■□□□□ 0.56
SMARCD3-203ENST00000392811 RS1O15537 224 aa18.53■□□□□ 0.56
SMARCD3-203ENST00000392811 IGLV1-51P01701 117 aa18.53■□□□□ 0.56
SMARCD3-203ENST00000392811 TM2D2Q9BX73 214 aa18.53■□□□□ 0.56
SMARCD3-203ENST00000392811 ZNRF2Q8NHG8 242 aa18.52■□□□□ 0.56
SMARCD3-203ENST00000392811 RAB37Q96AX2 223 aa18.52■□□□□ 0.55
SMARCD3-203ENST00000392811 LY6G6DO95868 133 aa18.51■□□□□ 0.55
SMARCD3-203ENST00000392811 CMC4P56277 68 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-203ENST00000392811 IGHV3-53P01767 116 aa18.5■□□□□ 0.55
SMARCD3-203ENST00000392811 TAL2Q16559 108 aa18.5■□□□□ 0.55
SMARCD3-203ENST00000392811 IL17DQ8TAD2 202 aa18.5■□□□□ 0.55
SMARCD3-203ENST00000392811 OR4C5Q8NGB2 326 aa18.5■□□□□ 0.55
SMARCD3-203ENST00000392811 HERVK_113P61574 105 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 WFDC10AQ9H1F0 79 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 HIVEP2P31629 2446 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 IGLV4-3A0A075B6K6 122 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 H3BUT2 72 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 SMIM13P0DJ93 91 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 TMEM170BQ5T4T1 132 aa18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 RNASE8Q8TDE3 154 aaKnown RBP18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 NAA38Q9BRA0 125 aaKnown RBP18.49■□□□□ 0.55
SMARCD3-203ENST00000392811 ZNF815PA8K554 130 aa18.48■□□□□ 0.55
SMARCD3-203ENST00000392811 HIST1H4GQ99525 98 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms