RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 H7C1H1 209 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 DPM2O94777 84 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 KRTAP24-1Q3LI83 254 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 A0A087WX48 190 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 IGKCP01834 107 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 ANKRD39Q53RE8 183 aa14.61□□□□□ -0.07
PTPN11-202ENST00000392597 MORN3Q6PF18 240 aaPredicted RBP14.61□□□□□ -0.07
PTPN11-202ENST00000392597 ERASQ7Z444 233 aa14.6□□□□□ -0.07
PTPN11-202ENST00000392597 CYSLTR1Q9Y271 337 aa14.6□□□□□ -0.07
PTPN11-202ENST00000392597 A0A1B0GV90 55 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 UFSP1Q6NVU6 142 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 ZFP2Q6ZN57 461 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 STPG4Q8N801 248 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 TMEM208Q9BTX3 173 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 C19orf73Q9NVV2 129 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 PF4P02776 101 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 RIPPLY3P57055 190 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 NEGR1Q7Z3B1 354 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 C1orf158Q8N1D5 194 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 LINC00482Q8N8I6 264 aa14.59□□□□□ -0.07
PTPN11-202ENST00000392597 PRM2P04554 102 aa14.58□□□□□ -0.08
PTPN11-202ENST00000392597 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.08
PTPN11-202ENST00000392597 FBN1P35555 2871 aaKnown RBP14.58□□□□□ -0.08
PTPN11-202ENST00000392597 RHODO00212 210 aa14.57□□□□□ -0.08
PTPN11-202ENST00000392597 PLNP26678 52 aa14.57□□□□□ -0.08
PTPN11-202ENST00000392597 RHOHQ15669 191 aa14.57□□□□□ -0.08
PTPN11-202ENST00000392597 COL5A1-AS1Q5SY13 56 aa14.57□□□□□ -0.08
PTPN11-202ENST00000392597 NEXN-AS1Q8NBZ9 246 aa14.57□□□□□ -0.08
PTPN11-202ENST00000392597 MRPL35Q9NZE8 188 aaKnown RBP14.57□□□□□ -0.08
PTPN11-202ENST00000392597 DLEU1O43261 78 aa14.56□□□□□ -0.08
PTPN11-202ENST00000392597 FGF6P10767 208 aa14.56□□□□□ -0.08
PTPN11-202ENST00000392597 BATFQ16520 125 aa14.56□□□□□ -0.08
PTPN11-202ENST00000392597 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
PTPN11-202ENST00000392597 IL17DQ8TAD2 202 aa14.56□□□□□ -0.08
PTPN11-202ENST00000392597 F8VRH5 84 aa14.55□□□□□ -0.08
PTPN11-202ENST00000392597 BOD1L2Q8IYS8 172 aa14.55□□□□□ -0.08
PTPN11-202ENST00000392597 BAALCQ8WXS3 180 aa14.55□□□□□ -0.08
PTPN11-202ENST00000392597 TP73-AS1Q9UF72 201 aa14.55□□□□□ -0.08
PTPN11-202ENST00000392597 TP53TG1Q9Y2A0 90 aa14.55□□□□□ -0.08
PTPN11-202ENST00000392597 NACAE9PAV3 2078 aa14.54□□□□□ -0.08
PTPN11-202ENST00000392597 I3L3M4 83 aa14.54□□□□□ -0.08
PTPN11-202ENST00000392597 TMEM141Q96I45 108 aa14.54□□□□□ -0.08
PTPN11-202ENST00000392597 TIMM17AQ99595 171 aa14.54□□□□□ -0.08
PTPN11-202ENST00000392597 C1QTNF4Q9BXJ3 329 aa14.54□□□□□ -0.08
PTPN11-202ENST00000392597 IGIPA6NJ69 53 aa14.53□□□□□ -0.08
PTPN11-202ENST00000392597 RS1O15537 224 aa14.53□□□□□ -0.08
PTPN11-202ENST00000392597 AZU1P20160 251 aa14.53□□□□□ -0.08
PTPN11-202ENST00000392597 RNASE8Q8TDE3 154 aaKnown RBP14.53□□□□□ -0.08
PTPN11-202ENST00000392597 COL6A5A8TX70 2615 aa14.53□□□□□ -0.08
PTPN11-202ENST00000392597 GIG44P09565 113 aaPredicted RBP14.52□□□□□ -0.08
PTPN11-202ENST00000392597 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.08
PTPN11-202ENST00000392597 CHTOPQ9Y3Y2 248 aaKnown RBP14.52□□□□□ -0.08
PTPN11-202ENST00000392597 HINT1P49773 126 aaPredicted RBP14.52□□□□□ -0.09
PTPN11-202ENST00000392597 INSL3P51460 131 aa14.52□□□□□ -0.09
PTPN11-202ENST00000392597 MRPL16Q9NX20 251 aaKnown RBP14.52□□□□□ -0.09
PTPN11-202ENST00000392597 SIVA1O15304 175 aa14.51□□□□□ -0.09
PTPN11-202ENST00000392597 TSHBP01222 138 aa14.51□□□□□ -0.09
PTPN11-202ENST00000392597 ZC2HC1BQ5TFG8 222 aa14.51□□□□□ -0.09
PTPN11-202ENST00000392597 C12orf54Q6X4T0 127 aa14.51□□□□□ -0.09
PTPN11-202ENST00000392597 C2orf91Q6ZV80 131 aa14.51□□□□□ -0.09
PTPN11-202ENST00000392597 IGHV3OR16-12A0A075B7B8 117 aa14.5□□□□□ -0.09
PTPN11-202ENST00000392597 IGHV3-73A0A0B4J1V6 119 aa14.5□□□□□ -0.09
PTPN11-202ENST00000392597 IGHV3-53P01767 116 aa14.5□□□□□ -0.09
PTPN11-202ENST00000392597 WFDC10AQ9H1F0 79 aa14.5□□□□□ -0.09
PTPN11-202ENST00000392597 NMUP48645 174 aa14.5□□□□□ -0.09
PTPN11-202ENST00000392597 PRSS29PA6NIE9 313 aa14.49□□□□□ -0.09
PTPN11-202ENST00000392597 DNAJC30Q96LL9 226 aa14.49□□□□□ -0.09
PTPN11-202ENST00000392597 TNFRSF18Q9Y5U5 241 aa14.49□□□□□ -0.09
PTPN11-202ENST00000392597 RPL39P62891 51 aaKnown RBP14.48□□□□□ -0.09
PTPN11-202ENST00000392597 MPV17L2Q567V2 206 aa14.48□□□□□ -0.09
PTPN11-202ENST00000392597 C20orf203Q8NBC4 194 aa14.48□□□□□ -0.09
PTPN11-202ENST00000392597 TENM1Q9UKZ4 2725 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 RPL35AP18077 110 aaKnown RBP14.47□□□□□ -0.09
PTPN11-202ENST00000392597 DAZ2Q13117 558 aaKnown RBP14.47□□□□□ -0.09
PTPN11-202ENST00000392597 PMVKQ15126 192 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 Q6ZSN1 163 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 GTSCR1Q86UQ5 136 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 PCP2Q8IVA1 136 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 CSNK1G2-AS1Q8NCQ2 148 aa14.47□□□□□ -0.09
PTPN11-202ENST00000392597 IGKV2D-26A0A0A0MRZ7 120 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 P0DMU3 169 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 FAM231AP0DMU4 169 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 FAM231CP0DMU5 169 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 C9orf66Q5T8R8 295 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 C16orf74Q96GX8 76 aa14.46□□□□□ -0.09
PTPN11-202ENST00000392597 TCTAP57738 103 aa14.46□□□□□ -0.1
PTPN11-202ENST00000392597 PAPPA-AS1Q5QFB9 102 aa14.46□□□□□ -0.1
PTPN11-202ENST00000392597 BVES-AS1Q5T3Y7 98 aa14.46□□□□□ -0.1
PTPN11-202ENST00000392597 CITED1Q99966 193 aa14.46□□□□□ -0.1
PTPN11-202ENST00000392597 TRGV1A0A0A0MS02 117 aa14.45□□□□□ -0.1
PTPN11-202ENST00000392597 OR4C5Q8NGB2 326 aa14.44□□□□□ -0.1
PTPN11-202ENST00000392597 DEFB104AQ8WTQ1 72 aa14.44□□□□□ -0.1
PTPN11-202ENST00000392597 CST9LQ9H4G1 147 aa14.44□□□□□ -0.1
PTPN11-202ENST00000392597 STAB1Q9NY15 2570 aa14.43□□□□□ -0.1
PTPN11-202ENST00000392597 TMEM97Q5BJF2 176 aa14.43□□□□□ -0.1
PTPN11-202ENST00000392597 TRAV4A0A0B4J268 109 aa14.42□□□□□ -0.1
PTPN11-202ENST00000392597 HIGD1BQ9P298 99 aa14.42□□□□□ -0.1
PTPN11-202ENST00000392597 NOTCH3Q9UM47 2321 aa14.42□□□□□ -0.1
PTPN11-202ENST00000392597 KRTAP21-3Q3LHN1 58 aa14.42□□□□□ -0.1
PTPN11-202ENST00000392597 PYGO1Q9Y3Y4 419 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms