RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
RPAIN-203ENST00000381209 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
RPAIN-203ENST00000381209 DKK2Q9UBU2 259 aa12.51□□□□□ -0.41
RPAIN-203ENST00000381209 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
RPAIN-203ENST00000381209 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
RPAIN-203ENST00000381209 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
RPAIN-203ENST00000381209 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
RPAIN-203ENST00000381209 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
RPAIN-203ENST00000381209 A0A087WX48 190 aa12.49□□□□□ -0.41
RPAIN-203ENST00000381209 RHOHQ15669 191 aa12.49□□□□□ -0.41
RPAIN-203ENST00000381209 ERASQ7Z444 233 aa12.49□□□□□ -0.41
RPAIN-203ENST00000381209 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
RPAIN-203ENST00000381209 SNHG12Q9BXW3 62 aa12.49□□□□□ -0.41
RPAIN-203ENST00000381209 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
RPAIN-203ENST00000381209 SLC25A34Q6PIV7 304 aa12.48□□□□□ -0.41
RPAIN-203ENST00000381209 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
RPAIN-203ENST00000381209 I3L3M4 83 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 DPM2O94777 84 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 IGKCP01834 107 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 GTSCR1Q86UQ5 136 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 EREGO14944 169 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 COX8AP10176 69 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
RPAIN-203ENST00000381209 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
RPAIN-203ENST00000381209 NSD1Q96L73 2696 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-203ENST00000381209 WNK1Q9H4A3 2382 aa12.46□□□□□ -0.41
RPAIN-203ENST00000381209 ANKRD39Q53RE8 183 aa12.46□□□□□ -0.42
RPAIN-203ENST00000381209 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.42
RPAIN-203ENST00000381209 TMEM141Q96I45 108 aa12.46□□□□□ -0.42
RPAIN-203ENST00000381209 DNAJC30Q96LL9 226 aa12.46□□□□□ -0.42
RPAIN-203ENST00000381209 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.42
RPAIN-203ENST00000381209 FLNBO75369 2602 aaKnown RBP12.45□□□□□ -0.42
RPAIN-203ENST00000381209 TSHBP01222 138 aa12.45□□□□□ -0.42
RPAIN-203ENST00000381209 STPG4Q8N801 248 aa12.45□□□□□ -0.42
RPAIN-203ENST00000381209 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
RPAIN-203ENST00000381209 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
RPAIN-203ENST00000381209 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
RPAIN-203ENST00000381209 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
RPAIN-203ENST00000381209 TRGV1A0A0A0MS02 117 aa12.44□□□□□ -0.42
RPAIN-203ENST00000381209 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
RPAIN-203ENST00000381209 PLNP26678 52 aa12.44□□□□□ -0.42
RPAIN-203ENST00000381209 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
RPAIN-203ENST00000381209 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
RPAIN-203ENST00000381209 C2CD3Q4AC94 2353 aa12.43□□□□□ -0.42
RPAIN-203ENST00000381209 F8VRH5 84 aa12.43□□□□□ -0.42
RPAIN-203ENST00000381209 Q6ZSN1 163 aa12.43□□□□□ -0.42
RPAIN-203ENST00000381209 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
RPAIN-203ENST00000381209 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
RPAIN-203ENST00000381209 SETD2Q9BYW2 2564 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-203ENST00000381209 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
RPAIN-203ENST00000381209 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 DLEU1O43261 78 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 P0DMU3 169 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
RPAIN-203ENST00000381209 PRSS29PA6NIE9 313 aa12.41□□□□□ -0.42
RPAIN-203ENST00000381209 CIDEAO60543 219 aa12.41□□□□□ -0.42
RPAIN-203ENST00000381209 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
RPAIN-203ENST00000381209 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
RPAIN-203ENST00000381209 FGF6P10767 208 aa12.4□□□□□ -0.42
RPAIN-203ENST00000381209 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
RPAIN-203ENST00000381209 Q6ZTI0 123 aa12.4□□□□□ -0.42
RPAIN-203ENST00000381209 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
RPAIN-203ENST00000381209 WIPF1O43516 503 aa12.39□□□□□ -0.43
RPAIN-203ENST00000381209 ZC2HC1BQ5TFG8 222 aa12.39□□□□□ -0.43
RPAIN-203ENST00000381209 PMVKQ15126 192 aa12.38□□□□□ -0.43
RPAIN-203ENST00000381209 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
RPAIN-203ENST00000381209 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
RPAIN-203ENST00000381209 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
RPAIN-203ENST00000381209 ZNF479Q96JC4 524 aa12.37□□□□□ -0.43
RPAIN-203ENST00000381209 SIVA1O15304 175 aa12.37□□□□□ -0.43
RPAIN-203ENST00000381209 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
RPAIN-203ENST00000381209 NPSP0C0P6 89 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 NMUP48645 174 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 CST9LQ9H4G1 147 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 Q9UF83 564 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
RPAIN-203ENST00000381209 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 K7EQD1 137 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 BATFQ16520 125 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 KRTAP24-1Q3LI83 254 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 COL5A1-AS1Q5SY13 56 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
RPAIN-203ENST00000381209 COTL1Q14019 142 aa12.34□□□□□ -0.43
RPAIN-203ENST00000381209 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 GAGE7O76087 117 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 HINT1P49773 126 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms