RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 A8MWV9 139 aa14.01□□□□□ -0.17
GMDS-201ENST00000380805 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
GMDS-201ENST00000380805 DPM2O94777 84 aa14□□□□□ -0.17
GMDS-201ENST00000380805 IGKCP01834 107 aa14□□□□□ -0.17
GMDS-201ENST00000380805 NSUN5P1Q3KNT7 163 aa14□□□□□ -0.17
GMDS-201ENST00000380805 ZFP2Q6ZN57 461 aa14□□□□□ -0.17
GMDS-201ENST00000380805 ERASQ7Z444 233 aa14□□□□□ -0.17
GMDS-201ENST00000380805 LINC01587Q99440 93 aa14□□□□□ -0.17
GMDS-201ENST00000380805 KIR2DL4Q99706 377 aa14□□□□□ -0.17
GMDS-201ENST00000380805 C19orf73Q9NVV2 129 aa14□□□□□ -0.17
GMDS-201ENST00000380805 NACAE9PAV3 2078 aa14□□□□□ -0.17
GMDS-201ENST00000380805 DLEU1O43261 78 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 STPG4Q8N801 248 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 IL17DQ8TAD2 202 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 SCGB3A1Q96QR1 104 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 TP73-AS1Q9UF72 201 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 ATRQ13535 2644 aa13.99□□□□□ -0.17
GMDS-201ENST00000380805 BOD1L2Q8IYS8 172 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 C1orf158Q8N1D5 194 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 NEXN-AS1Q8NBZ9 246 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 H7C1H1 209 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 HTN1P15515 57 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 MRPL35Q9NZE8 188 aaKnown RBP13.98□□□□□ -0.17
GMDS-201ENST00000380805 CYSLTR1Q9Y271 337 aa13.98□□□□□ -0.17
GMDS-201ENST00000380805 RHOHQ15669 191 aa13.97□□□□□ -0.17
GMDS-201ENST00000380805 COL5A1-AS1Q5SY13 56 aa13.97□□□□□ -0.17
GMDS-201ENST00000380805 NEGR1Q7Z3B1 354 aa13.97□□□□□ -0.17
GMDS-201ENST00000380805 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
GMDS-201ENST00000380805 F8VRH5 84 aa13.96□□□□□ -0.17
GMDS-201ENST00000380805 PLNP26678 52 aa13.96□□□□□ -0.17
GMDS-201ENST00000380805 C2orf91Q6ZV80 131 aa13.96□□□□□ -0.17
GMDS-201ENST00000380805 LINC00482Q8N8I6 264 aa13.96□□□□□ -0.17
GMDS-201ENST00000380805 IGIPA6NJ69 53 aa13.95□□□□□ -0.18
GMDS-201ENST00000380805 RHODO00212 210 aa13.95□□□□□ -0.18
GMDS-201ENST00000380805 PRM2P04554 102 aa13.95□□□□□ -0.18
GMDS-201ENST00000380805 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.95□□□□□ -0.18
GMDS-201ENST00000380805 BAALCQ8WXS3 180 aa13.95□□□□□ -0.18
GMDS-201ENST00000380805 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
GMDS-201ENST00000380805 SIVA1O15304 175 aa13.94□□□□□ -0.18
GMDS-201ENST00000380805 BATFQ16520 125 aa13.94□□□□□ -0.18
GMDS-201ENST00000380805 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
GMDS-201ENST00000380805 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
GMDS-201ENST00000380805 TP53TG1Q9Y2A0 90 aa13.94□□□□□ -0.18
GMDS-201ENST00000380805 RS1O15537 224 aa13.93□□□□□ -0.18
GMDS-201ENST00000380805 GIG44P09565 113 aaPredicted RBP13.93□□□□□ -0.18
GMDS-201ENST00000380805 RNASE8Q8TDE3 154 aaKnown RBP13.93□□□□□ -0.18
GMDS-201ENST00000380805 TMEM141Q96I45 108 aa13.93□□□□□ -0.18
GMDS-201ENST00000380805 I3L3M4 83 aa13.93□□□□□ -0.18
GMDS-201ENST00000380805 TSHBP01222 138 aa13.93□□□□□ -0.18
GMDS-201ENST00000380805 HINT1P49773 126 aaPredicted RBP13.93□□□□□ -0.18
GMDS-201ENST00000380805 AZU1P20160 251 aa13.92□□□□□ -0.18
GMDS-201ENST00000380805 ZC2HC1BQ5TFG8 222 aa13.92□□□□□ -0.18
GMDS-201ENST00000380805 C12orf54Q6X4T0 127 aa13.92□□□□□ -0.18
GMDS-201ENST00000380805 TMEM208Q9BTX3 173 aa13.92□□□□□ -0.18
GMDS-201ENST00000380805 CHTOPQ9Y3Y2 248 aaKnown RBP13.92□□□□□ -0.18
GMDS-201ENST00000380805 PF4P02776 101 aa13.91□□□□□ -0.18
GMDS-201ENST00000380805 TMEM263Q8WUH6 116 aaKnown RBP13.91□□□□□ -0.18
GMDS-201ENST00000380805 IGHV3-53P01767 116 aa13.9□□□□□ -0.18
GMDS-201ENST00000380805 MPV17L2Q567V2 206 aa13.9□□□□□ -0.18
GMDS-201ENST00000380805 IGKV2D-26A0A0A0MRZ7 120 aa13.9□□□□□ -0.18
GMDS-201ENST00000380805 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
GMDS-201ENST00000380805 PRSS29PA6NIE9 313 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 P0DMU3 169 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 FAM231AP0DMU4 169 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 FAM231CP0DMU5 169 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 NMUP48645 174 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 BVES-AS1Q5T3Y7 98 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
GMDS-201ENST00000380805 RPL39P62891 51 aaKnown RBP13.88□□□□□ -0.19
GMDS-201ENST00000380805 C20orf203Q8NBC4 194 aa13.88□□□□□ -0.19
GMDS-201ENST00000380805 CSNK1G2-AS1Q8NCQ2 148 aa13.88□□□□□ -0.19
GMDS-201ENST00000380805 DNAJC30Q96LL9 226 aa13.88□□□□□ -0.19
GMDS-201ENST00000380805 WFDC10AQ9H1F0 79 aa13.88□□□□□ -0.19
GMDS-201ENST00000380805 INSL3P51460 131 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 TENM1Q9UKZ4 2725 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 IGHV3-73A0A0B4J1V6 119 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 PMVKQ15126 192 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 Q6ZSN1 163 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
GMDS-201ENST00000380805 DAZ2Q13117 558 aaKnown RBP13.86□□□□□ -0.19
GMDS-201ENST00000380805 HIGD1BQ9P298 99 aa13.86□□□□□ -0.19
GMDS-201ENST00000380805 PAPPA-AS1Q5QFB9 102 aa13.85□□□□□ -0.19
GMDS-201ENST00000380805 TNFRSF18Q9Y5U5 241 aa13.85□□□□□ -0.19
GMDS-201ENST00000380805 COL6A5A8TX70 2615 aa13.85□□□□□ -0.19
GMDS-201ENST00000380805 IGLV4-69A0A075B6H9 119 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 IGHV3OR16-12A0A075B7B8 117 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 C16orf74Q96GX8 76 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 CST9LQ9H4G1 147 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 PLAC8L1A1L4L8 177 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 TCTAP57738 103 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 CITED1Q99966 193 aa13.84□□□□□ -0.19
GMDS-201ENST00000380805 NPSP0C0P6 89 aa13.83□□□□□ -0.2
GMDS-201ENST00000380805 HSD52Q0P140 79 aa13.83□□□□□ -0.2
GMDS-201ENST00000380805 TMEM97Q5BJF2 176 aa13.83□□□□□ -0.2
GMDS-201ENST00000380805 PYGO1Q9Y3Y4 419 aa13.83□□□□□ -0.2
GMDS-201ENST00000380805 MDFIQ99750 246 aa13.82□□□□□ -0.2
GMDS-201ENST00000380805 TRAV4A0A0B4J268 109 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
GMDS-201ENST00000380805 C9orf66Q5T8R8 295 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms