RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
PRDM16-203ENST00000378391 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 COL4A2P08572 1712 aa11.21□□□□□ -0.61
PRDM16-203ENST00000378391 SERP2Q8N6R1 65 aa11.21□□□□□ -0.61
PRDM16-203ENST00000378391 DKK4Q9UBT3 224 aa11.21□□□□□ -0.61
PRDM16-203ENST00000378391 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.62
PRDM16-203ENST00000378391 Q8N976 141 aa11.21□□□□□ -0.62
PRDM16-203ENST00000378391 UPK3BQ9BT76 320 aa11.21□□□□□ -0.62
PRDM16-203ENST00000378391 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 MAPK1IP1LQ8NDC0 245 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 TRAV4A0A0B4J268 109 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 RITA1Q96K30 269 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
PRDM16-203ENST00000378391 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
PRDM16-203ENST00000378391 COX7CP15954 63 aa11.2□□□□□ -0.62
PRDM16-203ENST00000378391 A0A0J9YXV3 536 aa11.19□□□□□ -0.62
PRDM16-203ENST00000378391 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
PRDM16-203ENST00000378391 E7EUB6 86 aa11.19□□□□□ -0.62
PRDM16-203ENST00000378391 IGHV4-28A0A0C4DH34 117 aa11.19□□□□□ -0.62
PRDM16-203ENST00000378391 SPRY2O43597 315 aa11.19□□□□□ -0.62
PRDM16-203ENST00000378391 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
PRDM16-203ENST00000378391 TNRC6AQ8NDV7 1962 aaKnown RBP11.19□□□□□ -0.62
PRDM16-203ENST00000378391 JMJD7-PLA2G4BH0Y9G9 81 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 MRPL36Q9P0J6 103 aaKnown RBP11.18□□□□□ -0.62
PRDM16-203ENST00000378391 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 E9PLD3 99 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 H0YGX0 51 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 APOC4P55056 127 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 IGLV1-47P01700 117 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 PRR4Q16378 134 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 SPATA12Q7Z6I5 190 aa11.18□□□□□ -0.62
PRDM16-203ENST00000378391 FAM208BQ5VWN6 2430 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 Q8N1Y9 231 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 SERP1Q9Y6X1 66 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 TTTY13Q9BZ97 58 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
PRDM16-203ENST00000378391 LINC00322Q6ZN03 302 aaPredicted RBP11.16□□□□□ -0.62
PRDM16-203ENST00000378391 CEP192Q8TEP8 1941 aa11.16□□□□□ -0.62
PRDM16-203ENST00000378391 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
PRDM16-203ENST00000378391 Q8N9W7 124 aa11.16□□□□□ -0.62
PRDM16-203ENST00000378391 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
PRDM16-203ENST00000378391 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
PRDM16-203ENST00000378391 Q96MF0 132 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
PRDM16-203ENST00000378391 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 MSMPQ1L6U9 139 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 NDUFB1O75438 58 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
PRDM16-203ENST00000378391 DEFB112Q30KQ8 113 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 SPG11Q96JI7 2443 aa11.15□□□□□ -0.62
PRDM16-203ENST00000378391 IGHV4-59P01825 116 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 TTC28Q96AY4 2481 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 XCL1P47992 114 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 NRGNQ92686 78 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
PRDM16-203ENST00000378391 NCKAP5O14513 1909 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 HTTP42858 3142 aa11.14□□□□□ -0.63
PRDM16-203ENST00000378391 HCFC1P51610 2035 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 BDP1A6H8Y1 2624 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 ACACBO00763 2458 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 LGALS9O00182 355 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 CGB3P0DN86 165 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 CGB7P0DN87 165 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
PRDM16-203ENST00000378391 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
PRDM16-203ENST00000378391 SPRY4Q9C004 299 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 BRCA2P51587 3418 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 IMUPQ9GZP8 106 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 PPDPFQ9H3Y8 114 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 C11orf86A6NJI1 115 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 K7EMT4 169 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
PRDM16-203ENST00000378391 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
PRDM16-203ENST00000378391 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
PRDM16-203ENST00000378391 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
PRDM16-203ENST00000378391 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
PRDM16-203ENST00000378391 IGF2-ASQ6U949 168 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 C5orf38Q86SI9 138 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 A0A0C4DFX4 3053 aa11.12□□□□□ -0.63
PRDM16-203ENST00000378391 A0A1W2PNU3 283 aaPredicted RBP11.11□□□□□ -0.63
PRDM16-203ENST00000378391 RMI2Q96E14 147 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 A0A096LPF7 62 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 WISP2O76076 250 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 SOSTDC1Q6X4U4 206 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 SNURFQ9Y675 71 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 TNCP24821 2201 aa11.11□□□□□ -0.63
PRDM16-203ENST00000378391 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
PRDM16-203ENST00000378391 BLCAPP62952 87 aa11.1□□□□□ -0.63
PRDM16-203ENST00000378391 RPL18AQ02543 176 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms