RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 MBD6Q96DN6 1003 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 MLST8Q9BVC4 326 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 RNF152Q8N8N0 203 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 RNF223E7ERA6 249 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 SEM1Q6ZVN7 128 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
VPS36-201ENST00000378060 TIMM17AQ99595 171 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 HIVEP3Q5T1R4 2406 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
VPS36-201ENST00000378060 CELSR2Q9HCU4 2923 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
VPS36-201ENST00000378060 GAGE6Q13070 117 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 MSMPQ1L6U9 139 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 MAP1AP78559 2803 aaPredicted RBP6.48□□□□□ -1.37
VPS36-201ENST00000378060 K7EMT4 169 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
VPS36-201ENST00000378060 A4D1N5 150 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 WFDC2Q14508 124 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 A0A0J9YXV3 536 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 CITED1Q99966 193 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 F8WEM9 126 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 Q9H8V8 135 aa6.47□□□□□ -1.37
VPS36-201ENST00000378060 HOXD3P31249 432 aaPredicted RBP6.46□□□□□ -1.37
VPS36-201ENST00000378060 SLC25A29Q8N8R3 303 aa6.46□□□□□ -1.37
VPS36-201ENST00000378060 LINC01620Q4KN68 170 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 SP5Q6BEB4 398 aaPredicted RBP6.46□□□□□ -1.38
VPS36-201ENST00000378060 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 VPREB3Q9UKI3 123 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 G3V4G9 280 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 PIFOQ8TCI5 191 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 U3KQE9 123 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 LRRK2Q5S007 2527 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 CCDC168Q8NDH2 2452 aa6.46□□□□□ -1.38
VPS36-201ENST00000378060 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
VPS36-201ENST00000378060 DAD1P61803 113 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 CDSNQ15517 529 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 C5orf56Q8N8D9 126 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 H0YGX0 51 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 FBXL19-AS1Q494R0 122 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 Q8N7P7 452 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 ATP6V0E2Q8NHE4 81 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 HELZ2Q9BYK8 2649 aaKnown RBP6.45□□□□□ -1.38
VPS36-201ENST00000378060 C2CD3Q4AC94 2353 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 CFHR3Q02985 330 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 FOXI1Q12951 378 aa6.45□□□□□ -1.38
VPS36-201ENST00000378060 LINC00322Q6ZN03 302 aaPredicted RBP6.45□□□□□ -1.38
VPS36-201ENST00000378060 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
VPS36-201ENST00000378060 NXPH4O95158 308 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 DEFB112Q30KQ8 113 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 TMEM89A2RUT3 159 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 SPRY2O43597 315 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 CRYBA4P53673 196 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 GPHB5Q86YW7 130 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 SVEP1Q4LDE5 3571 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 HCFC1P51610 2035 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
VPS36-201ENST00000378060 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
VPS36-201ENST00000378060 F5H768 121 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 H3BT86 120 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 IGHV4-59P01825 116 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 TRACP01848 142 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 IGLC6P0CF74 106 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 HAMPP81172 84 aa6.44□□□□□ -1.38
VPS36-201ENST00000378060 CRLF1O75462 422 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 FSTL3O95633 263 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 ICOSQ9Y6W8 199 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 B5MCH6 92 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 IGHV4-61A0A0C4DH41 118 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 IGHG2P01859 326 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 BLCAPP62952 87 aa6.43□□□□□ -1.38
VPS36-201ENST00000378060 DAZ2Q13117 558 aaKnown RBP6.43□□□□□ -1.38
VPS36-201ENST00000378060 DAZ4Q86SG3 579 aaKnown RBP6.43□□□□□ -1.38
VPS36-201ENST00000378060 DAZ3Q9NR90 486 aaKnown RBP6.43□□□□□ -1.38
VPS36-201ENST00000378060 APOC4P55056 127 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
VPS36-201ENST00000378060 MAPK1IP1LQ8NDC0 245 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 ORMDL1Q9P0S3 153 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 LOXL1Q08397 574 aaPredicted RBP6.42□□□□□ -1.38
VPS36-201ENST00000378060 Q8N1Y9 231 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 TRBV10-2A0A0K0K1G8 114 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 C20orf203Q8NBC4 194 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
VPS36-201ENST00000378060 C22orf34Q6ZV56 151 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 Q96MF0 132 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms