RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 Q6ZQT7 251 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 CRLF1O75462 422 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 EMP1P54849 157 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 EBI3Q14213 229 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 Q6ZS46 218 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 RAX2Q96IS3 184 aa11.34□□□□□ -0.59
CCHCR1-201ENST00000376266 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 C11orf86A6NJI1 115 aa11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 M0R381 172 aa11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 Q8N6K4 173 aa11.33□□□□□ -0.6
CCHCR1-201ENST00000376266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
CCHCR1-201ENST00000376266 ARL3P36405 182 aa11.32□□□□□ -0.6
CCHCR1-201ENST00000376266 SLC25A29Q8N8R3 303 aa11.32□□□□□ -0.6
CCHCR1-201ENST00000376266 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-201ENST00000376266 NF1P21359 2839 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 H7C2G1 150 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 SPRY2O43597 315 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 NPBQ8NG41 125 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 IGHV3OR16-13A0A075B7E8 117 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 IGHV3-74A0A0B4J1X5 117 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 A6NDX4 124 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 CRYGDP07320 174 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 MGPP08493 103 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 Q8N1Y9 231 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 ESM1Q9NQ30 184 aa11.31□□□□□ -0.6
CCHCR1-201ENST00000376266 M0QXV9 152 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 BUB3O43684 328 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 NDPQ00604 133 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 DPH3P1Q9H4G8 78 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
CCHCR1-201ENST00000376266 TMEM170BQ5T4T1 132 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 IGLV4-69A0A075B6H9 119 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 J3KRW8 73 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
CCHCR1-201ENST00000376266 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 Q6Q795 121 aa11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 Q8N9W7 124 aa11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 A4D1N5 150 aa11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 C15orf53Q8NAA6 179 aa11.28□□□□□ -0.6
CCHCR1-201ENST00000376266 IGHV3-33P01772 117 aa11.27□□□□□ -0.6
CCHCR1-201ENST00000376266 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.6
CCHCR1-201ENST00000376266 JMJD1CQ15652 2540 aa11.27□□□□□ -0.61
CCHCR1-201ENST00000376266 IGHV3-49A0A0A0MS15 119 aa11.27□□□□□ -0.61
CCHCR1-201ENST00000376266 PMVKQ15126 192 aa11.27□□□□□ -0.61
CCHCR1-201ENST00000376266 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
CCHCR1-201ENST00000376266 TSHBP01222 138 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 HILS1P60008 231 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 BLCAPP62952 87 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 Q1RN00 199 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 TEX49A0A1B0GTD5 131 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 PRR9Q5T870 116 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
CCHCR1-201ENST00000376266 ATXN8Q156A1 80 aa11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 J3QQQ9 107 aa11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 CLEC3BP05452 202 aa11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
CCHCR1-201ENST00000376266 P0DMU3 169 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 PPP1R17O96001 155 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 IGF1P05019 195 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
CCHCR1-201ENST00000376266 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 ELANEP08246 267 aa11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 AMELXQ99217 191 aa11.23□□□□□ -0.61
CCHCR1-201ENST00000376266 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 H3BMM0 161 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms