RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CFC1P0CG37 223 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 VPREB3Q9UKI3 123 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 RHODO00212 210 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
PTPN20-204ENST00000374346 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
PTPN20-204ENST00000374346 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
PTPN20-204ENST00000374346 P0DMU3 169 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 CRYBA4P53673 196 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 AMELXQ99217 191 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 CSPG4Q6UVK1 2322 aa8.42□□□□□ -1.06
PTPN20-204ENST00000374346 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-204ENST00000374346 TGFAP01135 160 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-204ENST00000374346 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-204ENST00000374346 A8MWV9 139 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 CD28P10747 220 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 HTN1P15515 57 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 TCTEX1D4Q5JR98 221 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 DUX5Q96PT3 197 aa8.41□□□□□ -1.06
PTPN20-204ENST00000374346 TCL1BO95988 128 aa8.4□□□□□ -1.06
PTPN20-204ENST00000374346 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.06
PTPN20-204ENST00000374346 TEN1Q86WV5 123 aa8.4□□□□□ -1.06
PTPN20-204ENST00000374346 PPDPFLQ8WWR9 84 aa8.4□□□□□ -1.06
PTPN20-204ENST00000374346 SPG11Q96JI7 2443 aa8.4□□□□□ -1.06
PTPN20-204ENST00000374346 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.07
PTPN20-204ENST00000374346 A0A0B4J2C4 111 aa8.4□□□□□ -1.07
PTPN20-204ENST00000374346 A4D1N5 150 aa8.4□□□□□ -1.07
PTPN20-204ENST00000374346 INSL3P51460 131 aa8.4□□□□□ -1.07
PTPN20-204ENST00000374346 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
PTPN20-204ENST00000374346 DUX3Q96PT4 197 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 M0R2P5 195 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 Q5PR19 223 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 Q6YL49 198 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
PTPN20-204ENST00000374346 DOPEY2Q9Y3R5 2298 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 A0A1B0GV72 72 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 DEFB131AP59861 70 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
PTPN20-204ENST00000374346 ZNF415Q09FC8 603 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 SPXQ9BT56 116 aa8.38□□□□□ -1.07
PTPN20-204ENST00000374346 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 IGHV3-30-3P0DP02 117 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 Q1RN00 199 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 ZNF702PQ9H963 129 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 SORL1Q92673 2214 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 SBSPONQ8IVN8 264 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
PTPN20-204ENST00000374346 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
PTPN20-204ENST00000374346 A0A0J9YXY3 114 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 H3BMM0 161 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 CIDEAO60543 219 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 NRGNQ92686 78 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 PTH2Q96A98 100 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 A8MTW9 85 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 M0QXV9 152 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
PTPN20-204ENST00000374346 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
PTPN20-204ENST00000374346 RBMY1FQ15415 496 aaKnown RBP8.36□□□□□ -1.07
PTPN20-204ENST00000374346 COL12A1Q99715 3063 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 SLC25A20O43772 301 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 SLURP1P55000 103 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
PTPN20-204ENST00000374346 A0A096LNT2 108 aa8.34□□□□□ -1.07
PTPN20-204ENST00000374346 H7C2G1 150 aa8.34□□□□□ -1.07
PTPN20-204ENST00000374346 DYNLRB2Q8TF09 96 aa8.34□□□□□ -1.07
PTPN20-204ENST00000374346 PRSS2P07478 247 aa8.34□□□□□ -1.08
PTPN20-204ENST00000374346 LINC01587Q99440 93 aa8.34□□□□□ -1.08
PTPN20-204ENST00000374346 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.08
PTPN20-204ENST00000374346 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.08
PTPN20-204ENST00000374346 PRRC2AP48634 2157 aaKnown RBP8.33□□□□□ -1.08
PTPN20-204ENST00000374346 C9JAW5 83 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 PROK1P58294 105 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 MAPK1IP1LQ8NDC0 245 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
PTPN20-204ENST00000374346 FSHBP01225 129 aa8.32□□□□□ -1.08
PTPN20-204ENST00000374346 INSP01308 110 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms