RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TIMM17AQ99595 171 aa11.04□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
COL9A2-202ENST00000372748 Q1RN00 199 aa11.04□□□□□ -0.64
COL9A2-202ENST00000372748 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
COL9A2-202ENST00000372748 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 POM121L12Q8N7R1 296 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 CELSR2Q9HCU4 2923 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 NDUFA4O00483 81 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 BLCAPP62952 87 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
COL9A2-202ENST00000372748 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.64
COL9A2-202ENST00000372748 NXPH4O95158 308 aa11.02□□□□□ -0.64
COL9A2-202ENST00000372748 TEX29Q8N6K0 151 aa11.02□□□□□ -0.64
COL9A2-202ENST00000372748 SS18L2Q9UHA2 77 aa11.02□□□□□ -0.64
COL9A2-202ENST00000372748 PF4V1P10720 104 aa11.02□□□□□ -0.65
COL9A2-202ENST00000372748 ZNF56Q15929 161 aa11.02□□□□□ -0.65
COL9A2-202ENST00000372748 C19orf54Q5BKX5 351 aa11.02□□□□□ -0.65
COL9A2-202ENST00000372748 H3BUX3 64 aa11.02□□□□□ -0.65
COL9A2-202ENST00000372748 NTN5Q8WTR8 489 aaPredicted RBP11.02□□□□□ -0.65
COL9A2-202ENST00000372748 TMEM263Q8WUH6 116 aaKnown RBP11.02□□□□□ -0.65
COL9A2-202ENST00000372748 SORL1Q92673 2214 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 APRG1Q8IVJ8 170 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 VCX2Q9H322 139 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
COL9A2-202ENST00000372748 A0A0J9YXV3 536 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 CRLF1O75462 422 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 RPL32P62910 135 aaKnown RBP11□□□□□ -0.65
COL9A2-202ENST00000372748 TMEM223A0PJW6 202 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 KLLNB2CW77 178 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 TMEM262E9PQX1 116 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 POLQO75417 2590 aa11□□□□□ -0.65
COL9A2-202ENST00000372748 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 P0DMU3 169 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 B5MCH6 92 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
COL9A2-202ENST00000372748 Q8N1Y9 231 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 CITED1Q99966 193 aa10.99□□□□□ -0.65
COL9A2-202ENST00000372748 LEPROTO15243 131 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 PIMREGQ9BSJ6 248 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 CREBBPQ92793 2442 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 M0QY20 66 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 RHODO00212 210 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 SPXQ9BT56 116 aa10.98□□□□□ -0.65
COL9A2-202ENST00000372748 LGALS9O00182 355 aa10.97□□□□□ -0.65
COL9A2-202ENST00000372748 PRSS2P07478 247 aa10.97□□□□□ -0.65
COL9A2-202ENST00000372748 NHLRC4P0CG21 123 aaPredicted RBP10.97□□□□□ -0.65
COL9A2-202ENST00000372748 CCL19Q99731 98 aa10.97□□□□□ -0.65
COL9A2-202ENST00000372748 IGHV4-30-2A0A087WSY4 118 aa10.97□□□□□ -0.65
COL9A2-202ENST00000372748 SNCGO76070 127 aa10.97□□□□□ -0.65
COL9A2-202ENST00000372748 DOPEY2Q9Y3R5 2298 aa10.96□□□□□ -0.65
COL9A2-202ENST00000372748 GAGE2BQ13066 116 aa10.96□□□□□ -0.65
COL9A2-202ENST00000372748 LINC01620Q4KN68 170 aa10.96□□□□□ -0.65
COL9A2-202ENST00000372748 GAGE2EQ4V326 116 aa10.96□□□□□ -0.65
COL9A2-202ENST00000372748 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.65
COL9A2-202ENST00000372748 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.65
COL9A2-202ENST00000372748 IGHG2P01859 326 aa10.96□□□□□ -0.66
COL9A2-202ENST00000372748 NPC2P61916 151 aa10.96□□□□□ -0.66
COL9A2-202ENST00000372748 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.66
COL9A2-202ENST00000372748 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 ATP5J2P56134 94 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
COL9A2-202ENST00000372748 DOPEY1Q5JWR5 2465 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 TRBV6-5A0A0K0K1A5 114 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 TRIAP1O43715 76 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 ATXN8Q156A1 80 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
COL9A2-202ENST00000372748 Q6ZSV7 163 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 IGHV3-16A0A0C4DH30 117 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 GAGE5Q13069 117 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 GAGE6Q13070 117 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
COL9A2-202ENST00000372748 AVPP01185 164 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 A6NDX4 124 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
COL9A2-202ENST00000372748 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 A8MZ25 164 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 IGHV3-30-3P0DP02 117 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 NRGNQ92686 78 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.93□□□□□ -0.66
COL9A2-202ENST00000372748 M0R2P5 195 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms