RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BHQ93079 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BNQ99877 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BMQ99879 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 PRADC1Q9BSG0 188 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 DPH3P1Q9H4G8 78 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 ICOSQ9Y6W8 199 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 RAB4BP61018 213 aa11.34□□□□□ -0.59
TMEM53-203ENST00000372242 RIGQ13278 110 aa11.34□□□□□ -0.59
TMEM53-203ENST00000372242 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
TMEM53-203ENST00000372242 TRGC2P03986 189 aa11.33□□□□□ -0.6
TMEM53-203ENST00000372242 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
TMEM53-203ENST00000372242 CAMPP49913 170 aa11.32□□□□□ -0.6
TMEM53-203ENST00000372242 NDUFA6P56556 154 aa11.32□□□□□ -0.6
TMEM53-203ENST00000372242 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
TMEM53-203ENST00000372242 LYSTQ99698 3801 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 GAGE12JA6NER3 117 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 IFITM10A6NMD0 228 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 SRIP30626 198 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 GAGE1Q13065 139 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 GAGE4Q13068 117 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 GAGE5Q13069 117 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 FRZBQ92765 325 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
TMEM53-203ENST00000372242 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 M0QY20 66 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 LY6G6CO95867 125 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 HBBP68871 147 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 ESRGQ1W209 222 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 AMN1Q8IY45 258 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
TMEM53-203ENST00000372242 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
TMEM53-203ENST00000372242 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 HIST3H2BBQ8N257 126 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 TRBV10-1A0A0K0K1A3 114 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 A0A1B0GW15 77 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 GATD1Q8NB37 220 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 RNF185Q96GF1 192 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
TMEM53-203ENST00000372242 LINC00694P0DN24 101 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 RAB4AP20338 218 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 CCL18P55774 89 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 OR10D4PQ8NGN7 298 aa11.27□□□□□ -0.61
TMEM53-203ENST00000372242 TRBV7-3A0A075B6L6 115 aa11.26□□□□□ -0.61
TMEM53-203ENST00000372242 H7C1H1 209 aa11.26□□□□□ -0.61
TMEM53-203ENST00000372242 GAS8-AS1O95177 125 aa11.26□□□□□ -0.61
TMEM53-203ENST00000372242 RPL36AP83881 106 aaKnown RBP11.26□□□□□ -0.61
TMEM53-203ENST00000372242 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
TMEM53-203ENST00000372242 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
TMEM53-203ENST00000372242 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
TMEM53-203ENST00000372242 RPL36ALQ969Q0 106 aaKnown RBP11.26□□□□□ -0.61
TMEM53-203ENST00000372242 LCE6AA0A183 80 aa11.25□□□□□ -0.61
TMEM53-203ENST00000372242 PKIAP61925 76 aa11.25□□□□□ -0.61
TMEM53-203ENST00000372242 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
TMEM53-203ENST00000372242 SH2D6Q7Z4S9 175 aa11.25□□□□□ -0.61
TMEM53-203ENST00000372242 RPL39LQ96EH5 51 aaKnown RBP11.25□□□□□ -0.61
TMEM53-203ENST00000372242 UBE2D3P61077 147 aa11.24□□□□□ -0.61
TMEM53-203ENST00000372242 UBE2D2P62837 147 aa11.24□□□□□ -0.61
TMEM53-203ENST00000372242 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
TMEM53-203ENST00000372242 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
TMEM53-203ENST00000372242 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
TMEM53-203ENST00000372242 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
TMEM53-203ENST00000372242 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
TMEM53-203ENST00000372242 NCR2O95944 276 aa11.23□□□□□ -0.61
TMEM53-203ENST00000372242 GTSF1LQ9H1H1 148 aa11.23□□□□□ -0.61
TMEM53-203ENST00000372242 TSTD3H0UI37 97 aa11.22□□□□□ -0.61
TMEM53-203ENST00000372242 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
TMEM53-203ENST00000372242 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
TMEM53-203ENST00000372242 C14orf144Q96I85 54 aa11.22□□□□□ -0.61
TMEM53-203ENST00000372242 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
TMEM53-203ENST00000372242 DNAJC30Q96LL9 226 aa11.21□□□□□ -0.61
TMEM53-203ENST00000372242 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
TMEM53-203ENST00000372242 DEFB104AQ8WTQ1 72 aa11.21□□□□□ -0.62
TMEM53-203ENST00000372242 DDTP30046 118 aa11.2□□□□□ -0.62
TMEM53-203ENST00000372242 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
TMEM53-203ENST00000372242 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
TMEM53-203ENST00000372242 FABP4P15090 132 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 CKS2P33552 79 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 CDPF1Q6NVV7 123 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
TMEM53-203ENST00000372242 ALMS1Q8TCU4 4167 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 D6R8Y8 96 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 TIRAPP58753 221 aa11.19□□□□□ -0.62
TMEM53-203ENST00000372242 JOSD1Q15040 202 aaPredicted RBP11.19□□□□□ -0.62
TMEM53-203ENST00000372242 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
TMEM53-203ENST00000372242 WFDC10BQ8IUB3 73 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms