RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SRIP30626 198 aa7.72□□□□□ -1.17
BRCC3-204ENST00000369462 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
BRCC3-204ENST00000369462 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
BRCC3-204ENST00000369462 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.17
BRCC3-204ENST00000369462 PRELID3AQ96N28 172 aa7.71□□□□□ -1.17
BRCC3-204ENST00000369462 ALKBH7Q9BT30 221 aaPredicted RBP7.71□□□□□ -1.18
BRCC3-204ENST00000369462 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
BRCC3-204ENST00000369462 H7C1H1 209 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 ANKRD39Q53RE8 183 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 C1orf196B1AJZ1 125 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 NPYP01303 97 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 NRACQ8N912 160 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 TRBV6-4A0A1B0GX49 114 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 K7EQD1 137 aa7.7□□□□□ -1.18
BRCC3-204ENST00000369462 A0A0J9YY99 117 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 TRAV26-1A0A087WT03 109 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 DEFB131BA0A096LNP1 70 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 CRYBA4P53673 196 aa7.69□□□□□ -1.18
BRCC3-204ENST00000369462 LOC100131303A0A0U1RQF7 123 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 PAX4O43316 350 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BKO60814 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BJP06899 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BOP23527 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BBP33778 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BDP58876 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BCP62807 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 RHOHQ15669 191 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST2H2BEQ16778 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.68□□□□□ -1.18
BRCC3-204ENST00000369462 NEXN-AS1Q8NBZ9 246 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BHQ93079 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BNQ99877 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 HIST1H2BMQ99879 126 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 PRADC1Q9BSG0 188 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 LOC389332A0A1B0GUA5 103 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 PPP1R17O96001 155 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 TNFRSF18Q9Y5U5 241 aa7.68□□□□□ -1.18
BRCC3-204ENST00000369462 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 SUMO2P61956 95 aaKnown RBP7.67□□□□□ -1.18
BRCC3-204ENST00000369462 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 C18orf32Q8TCD1 76 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 VSIG2Q96IQ7 327 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 ST20Q9HBF5 79 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GYPEP15421 78 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GAGE1Q13065 139 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GAGE4Q13068 117 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GAGE5Q13069 117 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
BRCC3-204ENST00000369462 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 SDHAF1A6NFY7 115 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 RAB5BP61020 215 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 RPL36AP83881 106 aaKnown RBP7.66□□□□□ -1.18
BRCC3-204ENST00000369462 RPL36ALQ969Q0 106 aaKnown RBP7.66□□□□□ -1.18
BRCC3-204ENST00000369462 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 C20orf78Q9BR46 151 aa7.66□□□□□ -1.18
BRCC3-204ENST00000369462 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.18
BRCC3-204ENST00000369462 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
BRCC3-204ENST00000369462 TMEM70Q9BUB7 260 aa7.65□□□□□ -1.18
BRCC3-204ENST00000369462 IFI27P40305 119 aaPredicted RBP7.65□□□□□ -1.18
BRCC3-204ENST00000369462 DNAJC30Q96LL9 226 aa7.65□□□□□ -1.18
BRCC3-204ENST00000369462 C1orf43Q9BWL3 253 aa7.65□□□□□ -1.18
BRCC3-204ENST00000369462 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.19
BRCC3-204ENST00000369462 BAGE3Q86Y29 109 aa7.65□□□□□ -1.19
BRCC3-204ENST00000369462 PRSS3P2Q8NHM4 247 aa7.65□□□□□ -1.19
BRCC3-204ENST00000369462 IGHV3-38A0A0C4DH36 116 aa7.64□□□□□ -1.19
BRCC3-204ENST00000369462 SMIM2Q9BVW6 85 aa7.64□□□□□ -1.19
BRCC3-204ENST00000369462 A0A096LPF7 62 aa7.64□□□□□ -1.19
BRCC3-204ENST00000369462 Q0VG73 95 aa7.64□□□□□ -1.19
BRCC3-204ENST00000369462 VCYO14598 125 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 UBE2D3P61077 147 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 UBE2D2P62837 147 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 PMCHP20382 165 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 NDUFA6P56556 154 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 NIT1Q86X76 327 aa7.63□□□□□ -1.19
BRCC3-204ENST00000369462 NXT2Q9NPJ8 142 aaKnown RBP7.63□□□□□ -1.19
BRCC3-204ENST00000369462 IGLV2-18A0A075B6J9 118 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 IGLL5B9A064 214 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 NUDT3O95989 172 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
BRCC3-204ENST00000369462 ICOSQ9Y6W8 199 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 H3BNG1 76 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 I3L3M4 83 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 TCAPO15273 167 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 RNASEKQ6P5S7 137 aaKnown RBP7.62□□□□□ -1.19
BRCC3-204ENST00000369462 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 Q8N8P6 123 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 URB1-AS1Q96HZ7 61 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 KIR2DL4Q99706 377 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
BRCC3-204ENST00000369462 LINC00614P0C842 121 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 836.6 ms