RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
LMNA-207ENST00000368301 J3QKU1 62 aa13.26□□□□□ -0.29
LMNA-207ENST00000368301 EMP1P54849 157 aa13.26□□□□□ -0.29
LMNA-207ENST00000368301 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
LMNA-207ENST00000368301 NAA38Q9BRA0 125 aaKnown RBP13.26□□□□□ -0.29
LMNA-207ENST00000368301 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
LMNA-207ENST00000368301 JMJD1CQ15652 2540 aa13.25□□□□□ -0.29
LMNA-207ENST00000368301 P0DMU3 169 aa13.25□□□□□ -0.29
LMNA-207ENST00000368301 FAM231AP0DMU4 169 aa13.25□□□□□ -0.29
LMNA-207ENST00000368301 FAM231CP0DMU5 169 aa13.25□□□□□ -0.29
LMNA-207ENST00000368301 GCN1Q92616 2671 aaKnown RBP13.24□□□□□ -0.29
LMNA-207ENST00000368301 CCL24O00175 119 aa13.24□□□□□ -0.29
LMNA-207ENST00000368301 FXYD2P54710 66 aa13.24□□□□□ -0.29
LMNA-207ENST00000368301 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
LMNA-207ENST00000368301 TEX29Q8N6K0 151 aa13.24□□□□□ -0.29
LMNA-207ENST00000368301 NACAE9PAV3 2078 aa13.24□□□□□ -0.29
LMNA-207ENST00000368301 GCSHP23434 173 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 FHL3Q13643 280 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 TRPT1Q86TN4 253 aaKnown RBP13.23□□□□□ -0.29
LMNA-207ENST00000368301 HIGD1BQ9P298 99 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 Q9UF83 564 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 RIPPLY3P57055 190 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 RAB37Q96AX2 223 aa13.23□□□□□ -0.29
LMNA-207ENST00000368301 IGLV4-69A0A075B6H9 119 aa13.22□□□□□ -0.29
LMNA-207ENST00000368301 LINC01006Q8NI28 216 aa13.22□□□□□ -0.29
LMNA-207ENST00000368301 OPRPNQ99935 248 aaPredicted RBP13.22□□□□□ -0.29
LMNA-207ENST00000368301 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
LMNA-207ENST00000368301 A6NDN8 102 aa13.22□□□□□ -0.29
LMNA-207ENST00000368301 JMJD8Q96S16 334 aa13.22□□□□□ -0.29
LMNA-207ENST00000368301 SPAG8Q99932 426 aaPredicted RBP13.22□□□□□ -0.29
LMNA-207ENST00000368301 C11orf86A6NJI1 115 aa13.21□□□□□ -0.29
LMNA-207ENST00000368301 LINC01587Q99440 93 aa13.21□□□□□ -0.29
LMNA-207ENST00000368301 H3BRM9 83 aa13.2□□□□□ -0.3
LMNA-207ENST00000368301 Q6ZSN1 163 aa13.2□□□□□ -0.3
LMNA-207ENST00000368301 CST9LQ9H4G1 147 aa13.2□□□□□ -0.3
LMNA-207ENST00000368301 NOTCH3Q9UM47 2321 aa13.2□□□□□ -0.3
LMNA-207ENST00000368301 XCL2Q9UBD3 114 aa13.2□□□□□ -0.3
LMNA-207ENST00000368301 OR11H12B2RN74 326 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 SMR3AQ99954 134 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 H3BUT2 72 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 K7ERJ3 54 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 M0R2P5 195 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 PMVKQ15126 192 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 OR4C5Q8NGB2 326 aa13.19□□□□□ -0.3
LMNA-207ENST00000368301 C9orf118A6NHY6 69 aa13.18□□□□□ -0.3
LMNA-207ENST00000368301 TIMM17AQ99595 171 aa13.18□□□□□ -0.3
LMNA-207ENST00000368301 RNASE1P07998 156 aaKnown RBP13.18□□□□□ -0.3
LMNA-207ENST00000368301 AZU1P20160 251 aa13.18□□□□□ -0.3
LMNA-207ENST00000368301 ZNF415Q09FC8 603 aa13.18□□□□□ -0.3
LMNA-207ENST00000368301 TMEM141Q96I45 108 aa13.18□□□□□ -0.3
LMNA-207ENST00000368301 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
LMNA-207ENST00000368301 E9PLD3 99 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 NSUN5P1Q3KNT7 163 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 I3L3M4 83 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 INSP01308 110 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 CEND1Q8N111 149 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 ZNRF2Q8NHG8 242 aa13.17□□□□□ -0.3
LMNA-207ENST00000368301 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
LMNA-207ENST00000368301 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
LMNA-207ENST00000368301 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
LMNA-207ENST00000368301 RHOHQ15669 191 aa13.16□□□□□ -0.3
LMNA-207ENST00000368301 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
LMNA-207ENST00000368301 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
LMNA-207ENST00000368301 STHQ8IWL8 128 aa13.15□□□□□ -0.3
LMNA-207ENST00000368301 TM2D2Q9BX73 214 aa13.15□□□□□ -0.3
LMNA-207ENST00000368301 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
LMNA-207ENST00000368301 A8MWV9 139 aa13.14□□□□□ -0.31
LMNA-207ENST00000368301 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
LMNA-207ENST00000368301 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
LMNA-207ENST00000368301 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
LMNA-207ENST00000368301 PLEKHB2Q96CS7 222 aa13.14□□□□□ -0.31
LMNA-207ENST00000368301 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
LMNA-207ENST00000368301 WFDC10AQ9H1F0 79 aa13.13□□□□□ -0.31
LMNA-207ENST00000368301 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
LMNA-207ENST00000368301 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
LMNA-207ENST00000368301 HIST1H4GQ99525 98 aa13.13□□□□□ -0.31
LMNA-207ENST00000368301 TRBV7-3A0A075B6L6 115 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 ZNF815PA8K554 130 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 TSPEAR-AS2P59090 65 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
LMNA-207ENST00000368301 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
LMNA-207ENST00000368301 SAP30O75446 220 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
LMNA-207ENST00000368301 RNASE8Q8TDE3 154 aaKnown RBP13.11□□□□□ -0.31
LMNA-207ENST00000368301 IGLV4-3A0A075B6K6 122 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 GAGE10A6NGK3 116 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 ADARB2-AS1A8MUL3 147 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 FAM104AQ969W3 186 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
LMNA-207ENST00000368301 CLUHP3Q96NS8 147 aa13.1□□□□□ -0.31
LMNA-207ENST00000368301 OTOGQ6ZRI0 2925 aa13.1□□□□□ -0.31
LMNA-207ENST00000368301 BEAN1Q3B7T3 259 aa13.1□□□□□ -0.31
LMNA-207ENST00000368301 IGHV3-38A0A0C4DH36 116 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms