RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 DEFB131AP59861 70 aa12.89□□□□□ -0.35
TRIM11-202ENST00000366699 CD300EQ496F6 205 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-202ENST00000366699 SCGB1D4Q6XE38 83 aa12.89□□□□□ -0.35
TRIM11-202ENST00000366699 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
TRIM11-202ENST00000366699 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
TRIM11-202ENST00000366699 ZNF876PQ49A33 203 aa12.88□□□□□ -0.35
TRIM11-202ENST00000366699 SORL1Q92673 2214 aa12.88□□□□□ -0.35
TRIM11-202ENST00000366699 RHOHQ15669 191 aa12.88□□□□□ -0.35
TRIM11-202ENST00000366699 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
TRIM11-202ENST00000366699 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-202ENST00000366699 CR1P17927 2039 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 DEFB104AQ8WTQ1 72 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 TEX15Q9BXT5 2789 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 A6NJY4 79 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
TRIM11-202ENST00000366699 MORN3Q6PF18 240 aaPredicted RBP12.87□□□□□ -0.35
TRIM11-202ENST00000366699 KNCNA6PVL3 124 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 A8MTW9 85 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 TMEM238C9JI98 176 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
TRIM11-202ENST00000366699 RRN3P1Q2M238 152 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 KLHL30-AS1Q8NEE0 82 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 MXRA5Q9NR99 2828 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 H3BMM0 161 aa12.86□□□□□ -0.35
TRIM11-202ENST00000366699 EMP1P54849 157 aa12.85□□□□□ -0.35
TRIM11-202ENST00000366699 HIST2H2BCQ6DN03 193 aa12.85□□□□□ -0.35
TRIM11-202ENST00000366699 SRSF9Q13242 221 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRIM11-202ENST00000366699 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
TRIM11-202ENST00000366699 F8W1H4 67 aa12.84□□□□□ -0.35
TRIM11-202ENST00000366699 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
TRIM11-202ENST00000366699 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
TRIM11-202ENST00000366699 PLEKHB2Q96CS7 222 aa12.84□□□□□ -0.35
TRIM11-202ENST00000366699 CREBBPQ92793 2442 aa12.83□□□□□ -0.35
TRIM11-202ENST00000366699 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
TRIM11-202ENST00000366699 I3L3M4 83 aa12.83□□□□□ -0.36
TRIM11-202ENST00000366699 Q6ZSV7 163 aa12.83□□□□□ -0.36
TRIM11-202ENST00000366699 ZNRF2Q8NHG8 242 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 RAX2Q96IS3 184 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 DUX3Q96PT4 197 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 DEFB114Q30KQ6 69 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 PIK3CD-AS1Q5SR53 167 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 C20orf203Q8NBC4 194 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
TRIM11-202ENST00000366699 HTN1P15515 57 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
TRIM11-202ENST00000366699 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 A0A0J9YY99 117 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 P0DMU3 169 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 EDA2RQ9HAV5 297 aa12.81□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 UBE2D1P51668 147 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 ZNF415Q09FC8 603 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
TRIM11-202ENST00000366699 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 A8MWV9 139 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 H3BMG7 143 aa12.8□□□□□ -0.36
TRIM11-202ENST00000366699 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
TRIM11-202ENST00000366699 M0R2P5 195 aa12.79□□□□□ -0.36
TRIM11-202ENST00000366699 PTH2Q96A98 100 aa12.79□□□□□ -0.36
TRIM11-202ENST00000366699 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-202ENST00000366699 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
TRIM11-202ENST00000366699 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
TRIM11-202ENST00000366699 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
TRIM11-202ENST00000366699 J3QQQ9 107 aa12.78□□□□□ -0.36
TRIM11-202ENST00000366699 KMT2BQ9UMN6 2715 aaPredicted RBP12.78□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
TRIM11-202ENST00000366699 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
TRIM11-202ENST00000366699 LGALS3P17931 250 aaKnown RBP12.78□□□□□ -0.36
TRIM11-202ENST00000366699 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
TRIM11-202ENST00000366699 HELZ2Q9BYK8 2649 aaKnown RBP12.77□□□□□ -0.37
TRIM11-202ENST00000366699 INSP01308 110 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 TSPEAR-AS2P59090 65 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.37
TRIM11-202ENST00000366699 WFDC2Q14508 124 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 LINC01587Q99440 93 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 VCX2Q9H322 139 aa12.77□□□□□ -0.37
TRIM11-202ENST00000366699 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
TRIM11-202ENST00000366699 TMEM223A0PJW6 202 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 SPXQ9BT56 116 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 IGLV4-3A0A075B6K6 122 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 LEPROTO15243 131 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 AMELXQ99217 191 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 PYGO1Q9Y3Y4 419 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
TRIM11-202ENST00000366699 IGHV3-30P01768 117 aa12.74□□□□□ -0.37
TRIM11-202ENST00000366699 IGHV3-30-5P0DP03 117 aa12.74□□□□□ -0.37
TRIM11-202ENST00000366699 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
TRIM11-202ENST00000366699 CCL24O00175 119 aa12.73□□□□□ -0.37
TRIM11-202ENST00000366699 RHODO00212 210 aa12.73□□□□□ -0.37
TRIM11-202ENST00000366699 FHL3Q13643 280 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms