RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 C1orf196B1AJZ1 125 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 F5H768 121 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 K7EQD1 137 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 PHOX2AO14813 284 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 HTN3P15516 51 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 GATA1P15976 413 aaPredicted RBP4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 SRIP30626 198 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 LINC00315P59091 139 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 NANOS2P60321 138 aaKnown RBP4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 KIAA1644Q3SXP7 199 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 OR10J3Q5JRS4 329 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 Q6ZTC4 211 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 PRELID3AQ96N28 172 aa4.78□□□□□ -1.64
RNU1-55P-201ENST00000365510 M0QY20 66 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 HOXA5P20719 270 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 RAB5BP61020 215 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 FHL2Q14192 279 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 SLC25A29Q8N8R3 303 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 MAP1LC3AQ9H492 121 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 HHLA3Q9XRX5 114 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 NACAE9PAV3 2078 aa4.77□□□□□ -1.65
RNU1-55P-201ENST00000365510 KMT2AQ03164 3969 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 TRAV10A0A0B4J240 114 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 TRBV6-5A0A0K0K1A5 114 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 PAX4O43316 350 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 TNFRSF6BO95407 300 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 NPYP01303 97 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 PMCHP20382 165 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 CRYBA4P53673 196 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 RPL36AP83881 106 aaKnown RBP4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 Q6ZSN1 163 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 NRACQ8N912 160 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 DNAJC30Q96LL9 226 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 C20orf78Q9BR46 151 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 ALKBH7Q9BT30 221 aaPredicted RBP4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 ST20Q9HBF5 79 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 NIT2Q9NQR4 276 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 TNFRSF18Q9Y5U5 241 aa4.76□□□□□ -1.65
RNU1-55P-201ENST00000365510 TRBV7-3A0A075B6L6 115 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 TRAV26-1A0A087WT03 109 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 A0A0J9YY99 117 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BKO60814 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAS8-AS1O95177 125 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BJP06899 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 P0DMU3 169 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 FAM231AP0DMU4 169 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 FAM231CP0DMU5 169 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 GYPEP15421 78 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BOP23527 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BBP33778 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BDP58876 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BCP62807 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST2H2BEQ16778 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 NEXN-AS1Q8NBZ9 246 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BHQ93079 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BNQ99877 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 HIST1H2BMQ99879 126 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 SMIM2Q9BVW6 85 aa4.75□□□□□ -1.65
RNU1-55P-201ENST00000365510 LOC389332A0A1B0GUA5 103 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAGE12JA6NER3 117 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 SDHAF1A6NFY7 115 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 H3BNG1 76 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 TCAPO15273 167 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 RPL32P62910 135 aaKnown RBP4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAGE1Q13065 139 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAGE4Q13068 117 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAGE5Q13069 117 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 GAGE13Q4V321 117 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 FA2HQ7L5A8 372 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 DAZ4Q86SG3 579 aaKnown RBP4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 ZNRF2Q8NHG8 242 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 C18orf32Q8TCD1 76 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 KIR2DL4Q99706 377 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 TMEM70Q9BUB7 260 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 DAZ3Q9NR90 486 aaKnown RBP4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 ICOSQ9Y6W8 199 aa4.74□□□□□ -1.65
RNU1-55P-201ENST00000365510 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 NUPR2A6NF83 97 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 I3L3M4 83 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 VCYO14598 125 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 S100A6P06703 90 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 FCER1GP30273 86 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 UBE2D3P61077 147 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 UBE2D2P62837 147 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 Q0VG73 95 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 MRPL23Q16540 153 aaKnown RBP4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 IQCJQ1A5X6 159 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 RNASEKQ6P5S7 137 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms