RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 FXYD2P54710 66 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 C2orf66Q6UXQ4 117 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 BAALCQ8WXS3 180 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 MXRA5Q9NR99 2828 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 TRAV12-3A0A0B4J271 114 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 A0A0J9YX75 114 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 H3BUT2 72 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 K7EQG2 157 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 LGALS9O00182 355 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 POLR2KP53803 58 aaKnown RBP5.37□□□□□ -1.55
CLCN3-202ENST00000360642 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 VCX2Q9H322 139 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 CST9LQ9H4G1 147 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 CHTOPQ9Y3Y2 248 aaKnown RBP5.37□□□□□ -1.55
CLCN3-202ENST00000360642 CEND1Q8N111 149 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 PHLDA1Q8WV24 401 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-202ENST00000360642 JPT2Q9H910 190 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 VPREB3Q9UKI3 123 aa5.37□□□□□ -1.55
CLCN3-202ENST00000360642 IGHV3-16A0A0C4DH30 117 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 K7EP34 96 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 ZNF688P0C7X2 276 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 CDKN1BP46527 198 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 TSHBP01222 138 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 LGALS1P09382 135 aaKnown RBP5.36□□□□□ -1.55
CLCN3-202ENST00000360642 CD7P09564 240 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 SMIM13P0DJ93 91 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 SNRPD3P62318 126 aaKnown RBP5.36□□□□□ -1.55
CLCN3-202ENST00000360642 TAL2Q16559 108 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 GTF2H5Q6ZYL4 71 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 SPAG8Q99932 426 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-202ENST00000360642 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 CRYGDP07320 174 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 RAB37Q96AX2 223 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 UBE2E2Q96LR5 201 aa5.36□□□□□ -1.55
CLCN3-202ENST00000360642 SONP18583 2426 aaKnown RBP5.36□□□□□ -1.55
CLCN3-202ENST00000360642 TRBV6-5A0A0K0K1A5 114 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 IGIPA6NJ69 53 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 LINC01619G3V211 115 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 SYNJ2BPP57105 145 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 OCIAD2Q56VL3 154 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 MDFICQ9P1T7 246 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 TRAV12-2A0A075B6T6 113 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 LINC01549A6NIU2 74 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 DUSP14O95147 198 aaKnown RBP5.35□□□□□ -1.55
CLCN3-202ENST00000360642 IGKV3-20P01619 116 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 ZFP2Q6ZN57 461 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 NEGR1Q7Z3B1 354 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 DUX5Q96PT3 197 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 AKAP9Q99996 3911 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
CLCN3-202ENST00000360642 TRBV27A0A0K0K1C4 114 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 E9PLD3 99 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 IGHV4-31P0DP07 118 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 HOXD3P31249 432 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-202ENST00000360642 AMTNQ6UX39 209 aa5.35□□□□□ -1.55
CLCN3-202ENST00000360642 SETD2Q9BYW2 2564 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-202ENST00000360642 TRBV7-3A0A075B6L6 115 aa5.34□□□□□ -1.55
CLCN3-202ENST00000360642 MYMXA0A1B0GTQ4 84 aa5.34□□□□□ -1.55
CLCN3-202ENST00000360642 RIPPLY3P57055 190 aa5.34□□□□□ -1.55
CLCN3-202ENST00000360642 MORN3Q6PF18 240 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-202ENST00000360642 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
CLCN3-202ENST00000360642 AGRNO00468 2067 aa5.34□□□□□ -1.55
CLCN3-202ENST00000360642 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 IGHV1OR15-1A0A075B7D0 117 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 M0QY20 66 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 COX6B1P14854 86 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 FOXI2Q6ZQN5 318 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 TEX15Q9BXT5 2789 aa5.34□□□□□ -1.56
CLCN3-202ENST00000360642 SDHAF1A6NFY7 115 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 OR11H12B2RN74 326 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 K7ERJ3 54 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 CIDEAO60543 219 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 RPL24P83731 157 aaKnown RBP5.33□□□□□ -1.56
CLCN3-202ENST00000360642 SPINK13Q1W4C9 94 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 Q8N2B8 174 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 OR11H1Q8NG94 326 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 OR11H2Q8NH07 326 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 TP53TG1Q9Y2A0 90 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 TMEM141Q96I45 108 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 TIMM17AQ99595 171 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 SPCS1Q9Y6A9 102 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 SAP30O75446 220 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 FABP2P12104 132 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 PRADC1Q9BSG0 188 aa5.33□□□□□ -1.56
CLCN3-202ENST00000360642 NHP2Q9NX24 153 aaKnown RBP5.33□□□□□ -1.56
CLCN3-202ENST00000360642 ZNF256Q9Y2P7 627 aaPredicted RBP5.33□□□□□ -1.56
CLCN3-202ENST00000360642 MYO9AB2RTY4 2548 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 NAV2Q8IVL1 2488 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 CR1P17927 2039 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 A0A1B0GWB2 263 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 A8MTW9 85 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
CLCN3-202ENST00000360642 RPL39P62891 51 aaKnown RBP5.32□□□□□ -1.56
CLCN3-202ENST00000360642 PMVKQ15126 192 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms