RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 PF4P02776 101 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 COX8CQ7Z4L0 72 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 PRO3102Q9H379 93 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 DMXL2Q8TDJ6 3036 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 LGALS9O00182 355 aa8.7□□□□□ -1.02
CNOT3-202ENST00000358389 RBAKDNA6NC62 111 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 M0R2P5 195 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 TRIAP1O43715 76 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 LINC00694P0DN24 101 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 ZNF876PQ49A33 203 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 SPANXA1Q9NS26 97 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 RNF5Q99942 180 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 BUB3O43684 328 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 JPT2Q9H910 190 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 EDA2RQ9HAV5 297 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 MOB4Q9Y3A3 225 aa8.69□□□□□ -1.02
CNOT3-202ENST00000358389 OOSP1A8MZH6 123 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 Q6Q795 121 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 CRYGDP07320 174 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 PRR9Q5T870 116 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
CNOT3-202ENST00000358389 TMEM263Q8WUH6 116 aaKnown RBP8.68□□□□□ -1.02
CNOT3-202ENST00000358389 ZNF462Q96JM2 2506 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 VCYO14598 125 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 UBE2E1P51965 193 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
CNOT3-202ENST00000358389 CD28P10747 220 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
CNOT3-202ENST00000358389 DSCR9P59020 149 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 RS1O15537 224 aa8.67□□□□□ -1.02
CNOT3-202ENST00000358389 KLK5Q9Y337 293 aaPredicted RBP8.67□□□□□ -1.02
CNOT3-202ENST00000358389 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 F6UB75 175 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 MINOS1Q5TGZ0 78 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 DNAL4O96015 105 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 HTN3P15516 51 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 Q6ZSV7 163 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 ADGRG4Q8IZF6 3080 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 ZZEF1O43149 2961 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 B4DSR2 109 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
CNOT3-202ENST00000358389 OVOL1O14753 267 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 M0R1W7 72 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 P0DMU3 169 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 FAM231AP0DMU4 169 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 FAM231CP0DMU5 169 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 TSHBP01222 138 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
CNOT3-202ENST00000358389 KAAG1Q9UBP8 84 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 ZNF580Q9UK33 172 aa8.65□□□□□ -1.02
CNOT3-202ENST00000358389 A0A0B4J2C4 111 aa8.65□□□□□ -1.03
CNOT3-202ENST00000358389 H7C423 109 aa8.65□□□□□ -1.03
CNOT3-202ENST00000358389 J3QKU1 62 aa8.65□□□□□ -1.03
CNOT3-202ENST00000358389 SYNJ2BPP57105 145 aa8.65□□□□□ -1.03
CNOT3-202ENST00000358389 SMG1Q96Q15 3661 aaKnown RBP8.64□□□□□ -1.03
CNOT3-202ENST00000358389 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 LEPROTO15243 131 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
CNOT3-202ENST00000358389 IGHV1-69DA0A0B4J2H0 117 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 HERVK_113P63121 156 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 DAND5Q8N907 189 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
CNOT3-202ENST00000358389 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 CEMP1Q6PRD7 247 aaPredicted RBP8.63□□□□□ -1.03
CNOT3-202ENST00000358389 TIMM21Q9BVV7 248 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 GAGE2AQ6NT46 116 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
CNOT3-202ENST00000358389 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 A0A0J9YXY3 114 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 C9orf47Q6ZRZ4 202 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 STHQ8IWL8 128 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 KLK9Q9UKQ9 250 aa8.62□□□□□ -1.03
CNOT3-202ENST00000358389 CSDC2Q9Y534 153 aaKnown RBP8.62□□□□□ -1.03
CNOT3-202ENST00000358389 H3BT86 120 aa8.61□□□□□ -1.03
CNOT3-202ENST00000358389 NDUFA12Q9UI09 145 aa8.61□□□□□ -1.03
CNOT3-202ENST00000358389 NDUFA7O95182 113 aa8.61□□□□□ -1.03
CNOT3-202ENST00000358389 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
CNOT3-202ENST00000358389 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
CNOT3-202ENST00000358389 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
CNOT3-202ENST00000358389 C11orf68Q9H3H3 251 aaKnown RBP8.61□□□□□ -1.03
CNOT3-202ENST00000358389 MGAQ8IWI9 3026 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms