RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FAM231AP0DMU4 169 aa10.37□□□□□ -0.75
CCNE1-202ENST00000357943 FAM231CP0DMU5 169 aa10.37□□□□□ -0.75
CCNE1-202ENST00000357943 RAB4BP61018 213 aa10.37□□□□□ -0.75
CCNE1-202ENST00000357943 TENM2Q9NT68 2774 aa10.37□□□□□ -0.75
CCNE1-202ENST00000357943 SACSQ9NZJ4 4579 aa10.37□□□□□ -0.75
CCNE1-202ENST00000357943 A0A1B0GW15 77 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 LINC00587B1AMM8 73 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 K7EQD1 137 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 MT-ND6P03923 174 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 RHOHQ15669 191 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
CCNE1-202ENST00000357943 DNAH1Q9P2D7 4330 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 TRAV26-2A0A0B4J265 109 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 H3BNG1 76 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BKO60814 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 NUDT3O95989 172 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BJP06899 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 GYPEP15421 78 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BOP23527 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BBP33778 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BDP58876 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BCP62807 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST2H2BEQ16778 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BHQ93079 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BNQ99877 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 HIST1H2BMQ99879 126 aa10.36□□□□□ -0.75
CCNE1-202ENST00000357943 RAB4AP20338 218 aa10.35□□□□□ -0.75
CCNE1-202ENST00000357943 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
CCNE1-202ENST00000357943 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
CCNE1-202ENST00000357943 APLNQ9ULZ1 77 aa10.35□□□□□ -0.75
CCNE1-202ENST00000357943 A0A096LPF7 62 aa10.34□□□□□ -0.75
CCNE1-202ENST00000357943 M0QY20 66 aa10.34□□□□□ -0.75
CCNE1-202ENST00000357943 NDUFA6P56556 154 aa10.34□□□□□ -0.75
CCNE1-202ENST00000357943 LBHQ53QV2 105 aaPredicted RBP10.34□□□□□ -0.75
CCNE1-202ENST00000357943 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
CCNE1-202ENST00000357943 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
CCNE1-202ENST00000357943 KMT2CQ8NEZ4 4911 aaKnown RBP10.34□□□□□ -0.75
CCNE1-202ENST00000357943 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 APCSP02743 223 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAGE1Q13065 139 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAGE4Q13068 117 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAGE5Q13069 117 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 ICOSQ9Y6W8 199 aa10.33□□□□□ -0.76
CCNE1-202ENST00000357943 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
CCNE1-202ENST00000357943 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
CCNE1-202ENST00000357943 TCTAP57738 103 aa10.31□□□□□ -0.76
CCNE1-202ENST00000357943 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CCNE1-202ENST00000357943 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
CCNE1-202ENST00000357943 ZNRF2Q8NHG8 242 aa10.31□□□□□ -0.76
CCNE1-202ENST00000357943 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
CCNE1-202ENST00000357943 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 SMKR1H3BMG3 65 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 H7C1H1 209 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 NCR2O95944 276 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 SRIP30626 198 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 PKIAP61925 76 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
CCNE1-202ENST00000357943 KMT2AQ03164 3969 aa10.3□□□□□ -0.76
CCNE1-202ENST00000357943 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 LINC00694P0DN24 101 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 RPL36AP83881 106 aaKnown RBP10.29□□□□□ -0.76
CCNE1-202ENST00000357943 RPL36ALQ969Q0 106 aaKnown RBP10.29□□□□□ -0.76
CCNE1-202ENST00000357943 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 PYY3Q5JQD4 70 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
CCNE1-202ENST00000357943 NEGR1Q7Z3B1 354 aa10.29□□□□□ -0.76
CCNE1-202ENST00000357943 UBE2D3P61077 147 aa10.28□□□□□ -0.76
CCNE1-202ENST00000357943 UBE2D2P62837 147 aa10.28□□□□□ -0.76
CCNE1-202ENST00000357943 D6R8Y8 96 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 CKS2P33552 79 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 ESRGQ1W209 222 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 OR10D4PQ8NGN7 298 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 ATP6V0E2Q8NHE4 81 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 TNFRSF18Q9Y5U5 241 aa10.27□□□□□ -0.77
CCNE1-202ENST00000357943 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
CCNE1-202ENST00000357943 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
CCNE1-202ENST00000357943 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
CCNE1-202ENST00000357943 NRACQ8N912 160 aa10.26□□□□□ -0.77
CCNE1-202ENST00000357943 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
CCNE1-202ENST00000357943 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
CCNE1-202ENST00000357943 ALKBH7Q9BT30 221 aaPredicted RBP10.25□□□□□ -0.77
CCNE1-202ENST00000357943 Q0VG73 95 aa10.25□□□□□ -0.77
CCNE1-202ENST00000357943 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
CCNE1-202ENST00000357943 ORMDL3Q8N138 153 aa10.25□□□□□ -0.77
CCNE1-202ENST00000357943 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
CCNE1-202ENST00000357943 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
CCNE1-202ENST00000357943 CCL18P55774 89 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms