RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TIRAPP58753 221 aa5.04□□□□□ -1.6
TRIM38-201ENST00000357085 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
TRIM38-201ENST00000357085 FAM236DA0A1B0GTK5 79 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 K7EMT4 169 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 TRIAP1O43715 76 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 FAM236CP0DP71 79 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 IGHV3-35A0A0C4DH35 117 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 POM121L12Q8N7R1 296 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 ARRDC1-AS1Q9H2J1 176 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 BRI3O95415 125 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 ZNF22P17026 224 aaPredicted RBP5.03□□□□□ -1.6
TRIM38-201ENST00000357085 DAZ2Q13117 558 aaKnown RBP5.03□□□□□ -1.6
TRIM38-201ENST00000357085 DAZ4Q86SG3 579 aaKnown RBP5.03□□□□□ -1.6
TRIM38-201ENST00000357085 DAZ3Q9NR90 486 aaKnown RBP5.03□□□□□ -1.6
TRIM38-201ENST00000357085 ZNRD1Q9P1U0 126 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 MALP21145 153 aa5.03□□□□□ -1.6
TRIM38-201ENST00000357085 MRPL36Q9P0J6 103 aaKnown RBP5.03□□□□□ -1.6
TRIM38-201ENST00000357085 TMEM256-PLSCR3K7ERE1 68 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 PROP1O75360 226 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 SMCPP49901 116 aaPredicted RBP5.02□□□□□ -1.61
TRIM38-201ENST00000357085 ZNF580Q9UK33 172 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 ODF3BA8MYP8 253 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 CRLF1O75462 422 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 HIVEP3Q5T1R4 2406 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 RPL39LQ96EH5 51 aaKnown RBP5.02□□□□□ -1.61
TRIM38-201ENST00000357085 C20orf173Q96LM9 149 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 COL27A1Q8IZC6 1860 aaPredicted RBP5.02□□□□□ -1.61
TRIM38-201ENST00000357085 IGHV3-49A0A0A0MS15 119 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 IGHV3-30-3P0DP02 117 aa5.02□□□□□ -1.61
TRIM38-201ENST00000357085 RNASE1P07998 156 aaKnown RBP5.01□□□□□ -1.61
TRIM38-201ENST00000357085 EBI3Q14213 229 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 A0A087WWL8 130 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 DSCR8Q96T75 97 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 RHPN1-AS1Q9BWJ2 59 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 TRBV10-1A0A0K0K1A3 114 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 MUC6Q6W4X9 2439 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 SPRNQ5BIV9 151 aa5.01□□□□□ -1.61
TRIM38-201ENST00000357085 PRRC2CQ9Y520 2896 aaKnown RBP5□□□□□ -1.61
TRIM38-201ENST00000357085 FHL3Q13643 280 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 CRIP1P50238 77 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 NHLRC4P0CG21 123 aaPredicted RBP5□□□□□ -1.61
TRIM38-201ENST00000357085 MRGPRG-AS1Q2M3A8 158 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 WIPF1O43516 503 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 ADARB2-AS1A8MUL3 147 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 PAX4O43316 350 aa5□□□□□ -1.61
TRIM38-201ENST00000357085 IGLV2-18A0A075B6J9 118 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
TRIM38-201ENST00000357085 FDCSPQ8NFU4 85 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 Q9H8V8 135 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 E7EUB6 86 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 RBM3P98179 157 aaKnown RBP4.99□□□□□ -1.61
TRIM38-201ENST00000357085 ZNF672Q499Z4 452 aaPredicted RBP4.99□□□□□ -1.61
TRIM38-201ENST00000357085 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 LOC107984640A0A0U1RRK4 108 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 LPAL2Q16609 132 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 LINC01587Q99440 93 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 COX6B1P14854 86 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 SS18Q15532 418 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 HTN1P15515 57 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 C1orf229Q6ZS94 237 aaPredicted RBP4.99□□□□□ -1.61
TRIM38-201ENST00000357085 JPT2Q9H910 190 aa4.99□□□□□ -1.61
TRIM38-201ENST00000357085 MUC4Q99102 2169 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 NAV2Q8IVL1 2488 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 PIEZO1Q92508 2521 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 A0A0G2JNJ9 132 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 PSMB8P28062 276 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 Q9UFV3 132 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 ANKRD17O75179 2603 aaKnown RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 LINC00158P58513 81 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 OPRPNQ99935 248 aaPredicted RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 SETD2Q9BYW2 2564 aaPredicted RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 PIP4P2Q8N4L2 257 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 IBA57-AS1B1ANH7 110 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 ATP6V0E1O15342 81 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 USP9YO00507 2555 aaPredicted RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 IGKV3D-20A0A0C4DH25 116 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 USP9XQ93008 2570 aaPredicted RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 SDIM1Q6ZPB5 146 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 NDUFB1O75438 58 aa4.98□□□□□ -1.61
TRIM38-201ENST00000357085 RPL39P62891 51 aaKnown RBP4.98□□□□□ -1.61
TRIM38-201ENST00000357085 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 KLLNB2CW77 178 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 USP17L23D6RBM5 183 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 IGIPA6NJ69 53 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 LY6LH3BQJ8 138 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
TRIM38-201ENST00000357085 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 A0A0U1RRA0 63 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 GPHB5Q86YW7 130 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 A0A1B0GW54 56 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 COX17Q14061 63 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms