RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
RAP1A-201ENST00000356415 PRELID3AQ96N28 172 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 GAGE1Q13065 139 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 GAGE4Q13068 117 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 GAGE5Q13069 117 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 Q9UF83 564 aa9.24□□□□□ -0.93
RAP1A-201ENST00000356415 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
RAP1A-201ENST00000356415 TENM3Q9P273 2699 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 IGLL5B9A064 214 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 H3BNG1 76 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
RAP1A-201ENST00000356415 TRBV7-3A0A075B6L6 115 aa9.22□□□□□ -0.93
RAP1A-201ENST00000356415 NPYP01303 97 aa9.22□□□□□ -0.93
RAP1A-201ENST00000356415 SRIP30626 198 aa9.22□□□□□ -0.93
RAP1A-201ENST00000356415 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
RAP1A-201ENST00000356415 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
RAP1A-201ENST00000356415 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
RAP1A-201ENST00000356415 NUPR2A6NF83 97 aa9.21□□□□□ -0.93
RAP1A-201ENST00000356415 PHOX2AO14813 284 aa9.21□□□□□ -0.93
RAP1A-201ENST00000356415 NUDT3O95989 172 aa9.21□□□□□ -0.93
RAP1A-201ENST00000356415 NRACQ8N912 160 aa9.21□□□□□ -0.93
RAP1A-201ENST00000356415 ALKBH7Q9BT30 221 aaPredicted RBP9.21□□□□□ -0.93
RAP1A-201ENST00000356415 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.93
RAP1A-201ENST00000356415 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
RAP1A-201ENST00000356415 MUC7Q8TAX7 377 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
RAP1A-201ENST00000356415 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 C15orf53Q8NAA6 179 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 MAP1LC3AQ9H492 121 aa9.2□□□□□ -0.94
RAP1A-201ENST00000356415 A0A096LPF7 62 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 UBE2D3P61077 147 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 UBE2D2P62837 147 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 SH2D6Q7Z4S9 175 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
RAP1A-201ENST00000356415 C1orf196B1AJZ1 125 aa9.18□□□□□ -0.94
RAP1A-201ENST00000356415 VCYO14598 125 aa9.18□□□□□ -0.94
RAP1A-201ENST00000356415 PMCHP20382 165 aa9.18□□□□□ -0.94
RAP1A-201ENST00000356415 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
RAP1A-201ENST00000356415 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
RAP1A-201ENST00000356415 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
RAP1A-201ENST00000356415 IGHV3-38A0A0C4DH36 116 aa9.17□□□□□ -0.94
RAP1A-201ENST00000356415 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
RAP1A-201ENST00000356415 PRSS3P2Q8NHM4 247 aa9.17□□□□□ -0.94
RAP1A-201ENST00000356415 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 I3L3M4 83 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 C18orf32Q8TCD1 76 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 TRBV27A0A0K0K1C4 114 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
RAP1A-201ENST00000356415 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
RAP1A-201ENST00000356415 NXT2Q9NPJ8 142 aaKnown RBP9.16□□□□□ -0.94
RAP1A-201ENST00000356415 FCER1GP30273 86 aa9.15□□□□□ -0.95
RAP1A-201ENST00000356415 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.95
RAP1A-201ENST00000356415 TCTAP57738 103 aa9.15□□□□□ -0.95
RAP1A-201ENST00000356415 COTL1Q14019 142 aa9.15□□□□□ -0.95
RAP1A-201ENST00000356415 IQCJQ1A5X6 159 aa9.15□□□□□ -0.95
RAP1A-201ENST00000356415 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.95
RAP1A-201ENST00000356415 NACAE9PAV3 2078 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 RAB5BP61020 215 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 TMEM97Q5BJF2 176 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
RAP1A-201ENST00000356415 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 Q8N8P6 123 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
RAP1A-201ENST00000356415 Q0VG73 95 aa9.13□□□□□ -0.95
RAP1A-201ENST00000356415 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
RAP1A-201ENST00000356415 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
RAP1A-201ENST00000356415 C3orf84H3BNL1 204 aa9.12□□□□□ -0.95
RAP1A-201ENST00000356415 TCAPO15273 167 aa9.12□□□□□ -0.95
RAP1A-201ENST00000356415 LINC00614P0C842 121 aa9.12□□□□□ -0.95
RAP1A-201ENST00000356415 CCL18P55774 89 aa9.12□□□□□ -0.95
RAP1A-201ENST00000356415 NIT1Q86X76 327 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms