RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
PDLIM7-202ENST00000355841 F5H697 171 aa12.4□□□□□ -0.42
PDLIM7-202ENST00000355841 PHOX2AO14813 284 aa12.4□□□□□ -0.42
PDLIM7-202ENST00000355841 LINC00315P59091 139 aa12.4□□□□□ -0.42
PDLIM7-202ENST00000355841 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.42
PDLIM7-202ENST00000355841 ALMS1Q8TCU4 4167 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 LCE6AA0A183 80 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 IFITM10A6NMD0 228 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 RHOHQ15669 191 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 BTF3L4Q96K17 158 aa12.39□□□□□ -0.43
PDLIM7-202ENST00000355841 MRPL23Q16540 153 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 HIST3H2BBQ8N257 126 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 SRIP30626 198 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 ESRGQ1W209 222 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 FRZBQ92765 325 aa12.38□□□□□ -0.43
PDLIM7-202ENST00000355841 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 RAB4BP61018 213 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 GAGE1Q13065 139 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 GAGE4Q13068 117 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 GAGE5Q13069 117 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 DPH3P1Q9H4G8 78 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 DNAH1Q9P2D7 4330 aa12.37□□□□□ -0.43
PDLIM7-202ENST00000355841 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
PDLIM7-202ENST00000355841 HYDINQ4G0P3 5121 aa12.36□□□□□ -0.43
PDLIM7-202ENST00000355841 VPS13DQ5THJ4 4388 aa12.36□□□□□ -0.43
PDLIM7-202ENST00000355841 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 CCL18P55774 89 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 RIGQ13278 110 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 PYY3Q5JQD4 70 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
PDLIM7-202ENST00000355841 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
PDLIM7-202ENST00000355841 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
PDLIM7-202ENST00000355841 CAMPP49913 170 aa12.34□□□□□ -0.43
PDLIM7-202ENST00000355841 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
PDLIM7-202ENST00000355841 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
PDLIM7-202ENST00000355841 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
PDLIM7-202ENST00000355841 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.44
PDLIM7-202ENST00000355841 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
PDLIM7-202ENST00000355841 M0QY20 66 aa12.32□□□□□ -0.44
PDLIM7-202ENST00000355841 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
PDLIM7-202ENST00000355841 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 LINC00694P0DN24 101 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 AMN1Q8IY45 258 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 RYR2Q92736 4967 aa12.31□□□□□ -0.44
PDLIM7-202ENST00000355841 GATD1Q8NB37 220 aa12.3□□□□□ -0.44
PDLIM7-202ENST00000355841 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 HBBP68871 147 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 RNF185Q96GF1 192 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 RYR3Q15413 4870 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-202ENST00000355841 TRAV9-1A0A075B6T8 112 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 FABP4P15090 132 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 RAB4AP20338 218 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 UBE2D3P61077 147 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 UBE2D2P62837 147 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 RASL11AQ6T310 242 aa12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-202ENST00000355841 H7C1H1 209 aa12.27□□□□□ -0.45
PDLIM7-202ENST00000355841 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-202ENST00000355841 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
PDLIM7-202ENST00000355841 A0A1B0GW15 77 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 TNFRSF18Q9Y5U5 241 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 NCR2O95944 276 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 ATP5L2Q7Z4Y8 100 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
PDLIM7-202ENST00000355841 M0R2N4 97 aa12.25□□□□□ -0.45
PDLIM7-202ENST00000355841 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
PDLIM7-202ENST00000355841 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
PDLIM7-202ENST00000355841 WFDC10BQ8IUB3 73 aa12.25□□□□□ -0.45
PDLIM7-202ENST00000355841 Q9H8V8 135 aa12.25□□□□□ -0.45
PDLIM7-202ENST00000355841 PKIAP61925 76 aa12.24□□□□□ -0.45
PDLIM7-202ENST00000355841 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
PDLIM7-202ENST00000355841 MRPL51Q4U2R6 128 aaKnown RBP12.23□□□□□ -0.45
PDLIM7-202ENST00000355841 TIRAPP58753 221 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 OR10J3Q5JRS4 329 aa12.22□□□□□ -0.45
PDLIM7-202ENST00000355841 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms