RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TRBV27A0A0K0K1C4 114 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 H7C1H1 209 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 PRSS1P07477 247 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 DEFB104AQ8WTQ1 72 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 TOMM6Q96B49 74 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 CSNK1G2-AS1Q8NCQ2 148 aa18.56■□□□□ 0.56
CLK2-201ENST00000355560 CYSRT1A8MQ03 144 aa18.55■□□□□ 0.56
CLK2-201ENST00000355560 C2orf66Q6UXQ4 117 aa18.55■□□□□ 0.56
CLK2-201ENST00000355560 EDA2RQ9HAV5 297 aa18.55■□□□□ 0.56
CLK2-201ENST00000355560 UQCR10Q9UDW1 63 aa18.54■□□□□ 0.56
CLK2-201ENST00000355560 RHODO00212 210 aa18.53■□□□□ 0.56
CLK2-201ENST00000355560 DKK2Q9UBU2 259 aa18.53■□□□□ 0.56
CLK2-201ENST00000355560 TRGV1A0A0A0MS02 117 aa18.53■□□□□ 0.56
CLK2-201ENST00000355560 KRTAP24-1Q3LI83 254 aa18.53■□□□□ 0.56
CLK2-201ENST00000355560 ZFP2Q6ZN57 461 aa18.53■□□□□ 0.56
CLK2-201ENST00000355560 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.52■□□□□ 0.56
CLK2-201ENST00000355560 P0DMU3 169 aa18.52■□□□□ 0.56
CLK2-201ENST00000355560 FAM231AP0DMU4 169 aa18.52■□□□□ 0.56
CLK2-201ENST00000355560 FAM231CP0DMU5 169 aa18.52■□□□□ 0.56
CLK2-201ENST00000355560 ODF1Q14990 250 aa18.52■□□□□ 0.56
CLK2-201ENST00000355560 SCGB3A1Q96QR1 104 aa18.52■□□□□ 0.56
CLK2-201ENST00000355560 RS1O15537 224 aa18.52■□□□□ 0.55
CLK2-201ENST00000355560 C16orf74Q96GX8 76 aa18.51■□□□□ 0.55
CLK2-201ENST00000355560 Q6ZSN1 163 aa18.5■□□□□ 0.55
CLK2-201ENST00000355560 Q6ZN92 141 aa18.49■□□□□ 0.55
CLK2-201ENST00000355560 Q6ZTI0 123 aa18.49■□□□□ 0.55
CLK2-201ENST00000355560 CYSLTR1Q9Y271 337 aa18.49■□□□□ 0.55
CLK2-201ENST00000355560 RRN3P1Q2M238 152 aa18.49■□□□□ 0.55
CLK2-201ENST00000355560 WFDC9Q8NEX5 89 aa18.49■□□□□ 0.55
CLK2-201ENST00000355560 NOP10Q9NPE3 64 aaKnown RBP18.49■□□□□ 0.55
CLK2-201ENST00000355560 G0S2P27469 103 aa18.48■□□□□ 0.55
CLK2-201ENST00000355560 TP53TG1Q9Y2A0 90 aa18.48■□□□□ 0.55
CLK2-201ENST00000355560 TRRAPQ9Y4A5 3859 aa18.48■□□□□ 0.55
CLK2-201ENST00000355560 PLAC8L1A1L4L8 177 aa18.47■□□□□ 0.55
CLK2-201ENST00000355560 I3L3M4 83 aa18.47■□□□□ 0.55
CLK2-201ENST00000355560 IGHV3-53P01767 116 aa18.47■□□□□ 0.55
CLK2-201ENST00000355560 DAZ2Q13117 558 aaKnown RBP18.47■□□□□ 0.55
CLK2-201ENST00000355560 OR4C5Q8NGB2 326 aa18.47■□□□□ 0.55
CLK2-201ENST00000355560 ERASQ7Z444 233 aa18.46■□□□□ 0.55
CLK2-201ENST00000355560 RIPPLY3P57055 190 aa18.46■□□□□ 0.55
CLK2-201ENST00000355560 Q9UF83 564 aa18.46■□□□□ 0.55
CLK2-201ENST00000355560 TNFRSF18Q9Y5U5 241 aa18.46■□□□□ 0.55
CLK2-201ENST00000355560 TSHBP01222 138 aa18.45■□□□□ 0.54
CLK2-201ENST00000355560 ZMAT4Q9H898 229 aa18.45■□□□□ 0.54
CLK2-201ENST00000355560 RPL39P62891 51 aaKnown RBP18.44■□□□□ 0.54
CLK2-201ENST00000355560 STPG4Q8N801 248 aa18.44■□□□□ 0.54
CLK2-201ENST00000355560 A0A087WX48 190 aa18.44■□□□□ 0.54
CLK2-201ENST00000355560 HNRNPA3P51991 378 aaKnown RBP18.44■□□□□ 0.54
CLK2-201ENST00000355560 RHOHQ15669 191 aa18.44■□□□□ 0.54
CLK2-201ENST00000355560 TP73-AS1Q9UF72 201 aa18.44■□□□□ 0.54
CLK2-201ENST00000355560 LINC01549A6NIU2 74 aa18.43■□□□□ 0.54
CLK2-201ENST00000355560 NEXN-AS1Q8NBZ9 246 aa18.43■□□□□ 0.54
CLK2-201ENST00000355560 ZNF479Q96JC4 524 aa18.43■□□□□ 0.54
CLK2-201ENST00000355560 MRPL35Q9NZE8 188 aaKnown RBP18.43■□□□□ 0.54
CLK2-201ENST00000355560 IGKCP01834 107 aa18.43■□□□□ 0.54
CLK2-201ENST00000355560 ANKRD39Q53RE8 183 aa18.43■□□□□ 0.54
CLK2-201ENST00000355560 TRAV12-1A0A0B4J245 112 aa18.42■□□□□ 0.54
CLK2-201ENST00000355560 DPM2O94777 84 aa18.42■□□□□ 0.54
CLK2-201ENST00000355560 BAALCQ8WXS3 180 aa18.42■□□□□ 0.54
CLK2-201ENST00000355560 CTAG1AP78358 180 aa18.41■□□□□ 0.54
CLK2-201ENST00000355560 TRAV4A0A0B4J268 109 aa18.41■□□□□ 0.54
CLK2-201ENST00000355560 EREGO14944 169 aa18.41■□□□□ 0.54
CLK2-201ENST00000355560 IGIPA6NJ69 53 aa18.4■□□□□ 0.54
CLK2-201ENST00000355560 WIPF1O43516 503 aa18.4■□□□□ 0.54
CLK2-201ENST00000355560 TCTAP57738 103 aa18.4■□□□□ 0.54
CLK2-201ENST00000355560 SNHG12Q9BXW3 62 aa18.4■□□□□ 0.54
CLK2-201ENST00000355560 SLC25A34Q6PIV7 304 aa18.39■□□□□ 0.53
CLK2-201ENST00000355560 OVOL2Q9BRP0 275 aa18.39■□□□□ 0.53
CLK2-201ENST00000355560 HHLA3Q9XRX5 114 aa18.39■□□□□ 0.53
CLK2-201ENST00000355560 GAGE12BA1L429 117 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 GAGE7O76087 117 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 GAGE12FP0CL80 117 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 GAGE12GP0CL81 117 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 GAGE12IP0CL82 117 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 DNAJC30Q96LL9 226 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 F8VRH5 84 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 M0R143 59 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 C3orf56Q8N813 242 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 TIMM17AQ99595 171 aa18.38■□□□□ 0.53
CLK2-201ENST00000355560 FBN1P35555 2871 aaKnown RBP18.37■□□□□ 0.53
CLK2-201ENST00000355560 TRGV2A0A075B6R0 118 aa18.37■□□□□ 0.53
CLK2-201ENST00000355560 C20orf203Q8NBC4 194 aa18.37■□□□□ 0.53
CLK2-201ENST00000355560 PRIMA1Q86XR5 153 aa18.37■□□□□ 0.53
CLK2-201ENST00000355560 CHTOPQ9Y3Y2 248 aaKnown RBP18.37■□□□□ 0.53
CLK2-201ENST00000355560 COX8AP10176 69 aa18.36■□□□□ 0.53
CLK2-201ENST00000355560 PLNP26678 52 aa18.36■□□□□ 0.53
CLK2-201ENST00000355560 EMP1P54849 157 aa18.36■□□□□ 0.53
CLK2-201ENST00000355560 TMEM141Q96I45 108 aa18.36■□□□□ 0.53
CLK2-201ENST00000355560 PRSS29PA6NIE9 313 aa18.35■□□□□ 0.53
CLK2-201ENST00000355560 MRPL52Q86TS9 123 aaKnown RBP18.35■□□□□ 0.53
CLK2-201ENST00000355560 ZC2HC1BQ5TFG8 222 aa18.34■□□□□ 0.53
CLK2-201ENST00000355560 MRPS16Q9Y3D3 137 aaKnown RBP18.34■□□□□ 0.53
CLK2-201ENST00000355560 K7EQD1 137 aa18.34■□□□□ 0.53
CLK2-201ENST00000355560 KIR2DL5BQ8NHK3 375 aa18.33■□□□□ 0.52
CLK2-201ENST00000355560 PHLDA1Q8WV24 401 aaPredicted RBP18.33■□□□□ 0.52
CLK2-201ENST00000355560 X6R8D5 127 aa18.33■□□□□ 0.52
CLK2-201ENST00000355560 IGHV3-38A0A0C4DH36 116 aa18.32■□□□□ 0.52
CLK2-201ENST00000355560 NMUP48645 174 aa18.32■□□□□ 0.52
CLK2-201ENST00000355560 APOC4P55056 127 aa18.32■□□□□ 0.52
CLK2-201ENST00000355560 LBHQ53QV2 105 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms