RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 FOXI2Q6ZQN5 318 aa13.4□□□□□ -0.26
APP-203ENST00000354192 PEMTQ9UBM1 199 aa13.4□□□□□ -0.26
APP-203ENST00000354192 HLA-DRB4X5D2U9 266 aa13.4□□□□□ -0.26
APP-203ENST00000354192 SMIM13P0DJ93 91 aa13.4□□□□□ -0.26
APP-203ENST00000354192 PLNP26678 52 aa13.4□□□□□ -0.26
APP-203ENST00000354192 C11orf86A6NJI1 115 aa13.39□□□□□ -0.27
APP-203ENST00000354192 BRI3O95415 125 aa13.39□□□□□ -0.27
APP-203ENST00000354192 CITED2Q99967 270 aaPredicted RBP13.39□□□□□ -0.27
APP-203ENST00000354192 WFDC10AQ9H1F0 79 aa13.39□□□□□ -0.27
APP-203ENST00000354192 KIF25-AS1Q9Y6Z4 181 aa13.39□□□□□ -0.27
APP-203ENST00000354192 GAGE12BA1L429 117 aa13.38□□□□□ -0.27
APP-203ENST00000354192 CRYGDP07320 174 aa13.38□□□□□ -0.27
APP-203ENST00000354192 ESM1Q9NQ30 184 aa13.38□□□□□ -0.27
APP-203ENST00000354192 SPCS1Q9Y6A9 102 aa13.38□□□□□ -0.27
APP-203ENST00000354192 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
APP-203ENST00000354192 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
APP-203ENST00000354192 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
APP-203ENST00000354192 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
APP-203ENST00000354192 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
APP-203ENST00000354192 H3BMM0 161 aa13.37□□□□□ -0.27
APP-203ENST00000354192 APOMO95445 188 aa13.37□□□□□ -0.27
APP-203ENST00000354192 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
APP-203ENST00000354192 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
APP-203ENST00000354192 VPS25Q9BRG1 176 aa13.37□□□□□ -0.27
APP-203ENST00000354192 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
APP-203ENST00000354192 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
APP-203ENST00000354192 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
APP-203ENST00000354192 ZMAT4Q9H898 229 aa13.36□□□□□ -0.27
APP-203ENST00000354192 SAP30O75446 220 aa13.36□□□□□ -0.27
APP-203ENST00000354192 PPP1R17O96001 155 aa13.36□□□□□ -0.27
APP-203ENST00000354192 AMTNQ6UX39 209 aa13.36□□□□□ -0.27
APP-203ENST00000354192 MAP6D1Q9H9H5 199 aa13.36□□□□□ -0.27
APP-203ENST00000354192 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
APP-203ENST00000354192 STHQ8IWL8 128 aa13.36□□□□□ -0.27
APP-203ENST00000354192 TNFRSF18Q9Y5U5 241 aa13.36□□□□□ -0.27
APP-203ENST00000354192 M0QY20 66 aa13.35□□□□□ -0.27
APP-203ENST00000354192 PLEKHB2Q96CS7 222 aa13.35□□□□□ -0.27
APP-203ENST00000354192 C9orf118A6NHY6 69 aa13.35□□□□□ -0.27
APP-203ENST00000354192 TSHBP01222 138 aa13.35□□□□□ -0.27
APP-203ENST00000354192 TRGV11A0A075B6L2 103 aa13.34□□□□□ -0.27
APP-203ENST00000354192 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
APP-203ENST00000354192 FABP2P12104 132 aa13.34□□□□□ -0.27
APP-203ENST00000354192 POLR2KP53803 58 aaKnown RBP13.34□□□□□ -0.27
APP-203ENST00000354192 H7C2G1 150 aa13.34□□□□□ -0.27
APP-203ENST00000354192 CCL24O00175 119 aa13.34□□□□□ -0.27
APP-203ENST00000354192 LGALS9O00182 355 aa13.34□□□□□ -0.27
APP-203ENST00000354192 FSHBP01225 129 aa13.34□□□□□ -0.27
APP-203ENST00000354192 MORN3Q6PF18 240 aaPredicted RBP13.34□□□□□ -0.27
APP-203ENST00000354192 KRTAP1-3Q8IUG1 177 aa13.34□□□□□ -0.27
APP-203ENST00000354192 C9orf85Q96MD7 179 aa13.34□□□□□ -0.27
APP-203ENST00000354192 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
APP-203ENST00000354192 TRGV1A0A0A0MS02 117 aa13.33□□□□□ -0.28
APP-203ENST00000354192 AZU1P20160 251 aa13.33□□□□□ -0.28
APP-203ENST00000354192 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.33□□□□□ -0.28
APP-203ENST00000354192 MYMXA0A1B0GTQ4 84 aa13.33□□□□□ -0.28
APP-203ENST00000354192 IGKV2-29A2NJV5 120 aaPredicted RBP13.33□□□□□ -0.28
APP-203ENST00000354192 H3BRM9 83 aa13.33□□□□□ -0.28
APP-203ENST00000354192 MED14OSP0DP75 135 aa13.33□□□□□ -0.28
APP-203ENST00000354192 DEFB114Q30KQ6 69 aa13.33□□□□□ -0.28
APP-203ENST00000354192 CEND1Q8N111 149 aa13.33□□□□□ -0.28
APP-203ENST00000354192 GTF2H5Q6ZYL4 71 aa13.32□□□□□ -0.28
APP-203ENST00000354192 SPXQ9BT56 116 aa13.32□□□□□ -0.28
APP-203ENST00000354192 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
APP-203ENST00000354192 TMEM89A2RUT3 159 aa13.32□□□□□ -0.28
APP-203ENST00000354192 LINC01546A6NGU7 62 aa13.32□□□□□ -0.28
APP-203ENST00000354192 PMVKQ15126 192 aa13.32□□□□□ -0.28
APP-203ENST00000354192 Q6ZSN1 163 aa13.32□□□□□ -0.28
APP-203ENST00000354192 AKAP9Q99996 3911 aa13.32□□□□□ -0.28
APP-203ENST00000354192 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
APP-203ENST00000354192 CST9LQ9H4G1 147 aa13.32□□□□□ -0.28
APP-203ENST00000354192 TRPT1Q86TN4 253 aaKnown RBP13.31□□□□□ -0.28
APP-203ENST00000354192 C4orf3Q8WVX3 66 aa13.31□□□□□ -0.28
APP-203ENST00000354192 VCX2Q9H322 139 aa13.31□□□□□ -0.28
APP-203ENST00000354192 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
APP-203ENST00000354192 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
APP-203ENST00000354192 FOSL1P15407 271 aa13.3□□□□□ -0.28
APP-203ENST00000354192 NPC2P61916 151 aa13.3□□□□□ -0.28
APP-203ENST00000354192 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
APP-203ENST00000354192 SIVA1O15304 175 aa13.3□□□□□ -0.28
APP-203ENST00000354192 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
APP-203ENST00000354192 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
APP-203ENST00000354192 KMT2BQ9UMN6 2715 aaPredicted RBP13.29□□□□□ -0.28
APP-203ENST00000354192 A0A1W2PPM0 123 aa13.29□□□□□ -0.28
APP-203ENST00000354192 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
APP-203ENST00000354192 HERVK_113P61574 105 aa13.29□□□□□ -0.28
APP-203ENST00000354192 I3L3M4 83 aa13.28□□□□□ -0.28
APP-203ENST00000354192 TRAV12-1A0A0B4J245 112 aa13.28□□□□□ -0.28
APP-203ENST00000354192 VWFP04275 2813 aa13.28□□□□□ -0.28
APP-203ENST00000354192 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
APP-203ENST00000354192 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
APP-203ENST00000354192 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
APP-203ENST00000354192 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.28
APP-203ENST00000354192 A0A0U1RRA0 63 aa13.27□□□□□ -0.28
APP-203ENST00000354192 LGALS3P17931 250 aaKnown RBP13.27□□□□□ -0.28
APP-203ENST00000354192 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.28
APP-203ENST00000354192 A8MZ25 164 aa13.27□□□□□ -0.29
APP-203ENST00000354192 NXPH4O95158 308 aa13.27□□□□□ -0.29
APP-203ENST00000354192 ZNF415Q09FC8 603 aa13.27□□□□□ -0.29
APP-203ENST00000354192 INSP01308 110 aa13.26□□□□□ -0.29
APP-203ENST00000354192 C12orf74Q32Q52 190 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms