RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 SOCS3O14543 225 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 CD3EP07766 207 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 A8MZ25 164 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 AKAP13Q12802 2813 aa10.58□□□□□ -0.71
RLIM-202ENST00000349225 I3L3M4 83 aa10.58□□□□□ -0.72
RLIM-202ENST00000349225 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
RLIM-202ENST00000349225 LINC00477Q96M19 166 aa10.58□□□□□ -0.72
RLIM-202ENST00000349225 VPS13CQ709C8 3753 aa10.58□□□□□ -0.72
RLIM-202ENST00000349225 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 PRSS2P07478 247 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 SPXQ9BT56 116 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 KLK9Q2XQG4 91 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 KLK9Q9UKQ9 250 aa10.57□□□□□ -0.72
RLIM-202ENST00000349225 IGHV1-69P01742 117 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 C9orf139Q6ZV77 190 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 F5H697 171 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 NDUFA7O95182 113 aa10.56□□□□□ -0.72
RLIM-202ENST00000349225 ANKRD11Q6UB99 2663 aaPredicted RBP10.56□□□□□ -0.72
RLIM-202ENST00000349225 LY6DQ14210 128 aa10.55□□□□□ -0.72
RLIM-202ENST00000349225 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
RLIM-202ENST00000349225 TMEM101Q96IK0 257 aa10.55□□□□□ -0.72
RLIM-202ENST00000349225 C3orf22Q8N5N4 141 aa10.55□□□□□ -0.72
RLIM-202ENST00000349225 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 HERVK_113P63121 156 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 C9orf153Q5TBE3 101 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 NSUN5P1Q3KNT7 163 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 IGFL3Q6UXB1 125 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 B9A039 149 aa10.54□□□□□ -0.72
RLIM-202ENST00000349225 M0QY20 66 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 DCANP1Q8TF63 244 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 TMEM61Q8N0U2 210 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 DAND5Q8N907 189 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
RLIM-202ENST00000349225 NPFFO15130 113 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
RLIM-202ENST00000349225 RNASE13Q5GAN3 156 aaKnown RBP10.52□□□□□ -0.72
RLIM-202ENST00000349225 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.72
RLIM-202ENST00000349225 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.72
RLIM-202ENST00000349225 SPANXCQ9NY87 97 aa10.52□□□□□ -0.72
RLIM-202ENST00000349225 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
RLIM-202ENST00000349225 MIAQ16674 131 aa10.52□□□□□ -0.73
RLIM-202ENST00000349225 CITED2Q99967 270 aaPredicted RBP10.52□□□□□ -0.73
RLIM-202ENST00000349225 C22orf24Q9Y442 160 aa10.52□□□□□ -0.73
RLIM-202ENST00000349225 M0R1W7 72 aa10.51□□□□□ -0.73
RLIM-202ENST00000349225 OVOL1O14753 267 aa10.51□□□□□ -0.73
RLIM-202ENST00000349225 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
RLIM-202ENST00000349225 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
RLIM-202ENST00000349225 SDIM1Q6ZPB5 146 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 LINC00526Q96FQ7 95 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 TRBV7-1A0A0A6YYK4 115 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 GVINP1Q7Z2Y8 2422 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 KLLNB2CW77 178 aa10.5□□□□□ -0.73
RLIM-202ENST00000349225 COX6CP09669 75 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 ZFP36P26651 326 aaKnown RBP10.49□□□□□ -0.73
RLIM-202ENST00000349225 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 UQCRQO14949 82 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 EDN2P20800 178 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 COL12A1Q99715 3063 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 RHOHQ15669 191 aa10.49□□□□□ -0.73
RLIM-202ENST00000349225 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
RLIM-202ENST00000349225 MINOS1Q5TGZ0 78 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 EP300Q09472 2414 aaPredicted RBP10.48□□□□□ -0.73
RLIM-202ENST00000349225 TRAV12-3A0A0B4J271 114 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 LINC01560Q8TB33 94 aa10.48□□□□□ -0.73
RLIM-202ENST00000349225 BDP1A6H8Y1 2624 aa10.47□□□□□ -0.73
RLIM-202ENST00000349225 IGHG2P01859 326 aa10.47□□□□□ -0.73
RLIM-202ENST00000349225 C5orf47Q569G3 176 aa10.47□□□□□ -0.73
RLIM-202ENST00000349225 Q8N2B8 174 aa10.47□□□□□ -0.73
RLIM-202ENST00000349225 ACACAQ13085 2346 aa10.47□□□□□ -0.73
RLIM-202ENST00000349225 C5orf38Q86SI9 138 aa10.46□□□□□ -0.73
RLIM-202ENST00000349225 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
RLIM-202ENST00000349225 BEAN1Q3B7T3 259 aa10.46□□□□□ -0.73
RLIM-202ENST00000349225 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
RLIM-202ENST00000349225 ANKHD1Q8IWZ3 2542 aaKnown RBP10.46□□□□□ -0.73
RLIM-202ENST00000349225 LINC00643Q86TS7 51 aa10.46□□□□□ -0.74
RLIM-202ENST00000349225 C9orf85Q96MD7 179 aa10.46□□□□□ -0.74
RLIM-202ENST00000349225 Q9UF83 564 aa10.46□□□□□ -0.74
RLIM-202ENST00000349225 IGF2-ASQ6U949 168 aa10.45□□□□□ -0.74
RLIM-202ENST00000349225 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
RLIM-202ENST00000349225 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
RLIM-202ENST00000349225 SPTBN1Q01082 2364 aaKnown RBP10.45□□□□□ -0.74
RLIM-202ENST00000349225 DAZ2Q13117 558 aaKnown RBP10.45□□□□□ -0.74
RLIM-202ENST00000349225 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
RLIM-202ENST00000349225 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
RLIM-202ENST00000349225 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
RLIM-202ENST00000349225 MINOS1-NBL1R4GNA1 71 aa10.45□□□□□ -0.74
RLIM-202ENST00000349225 ACYP1P07311 99 aa10.44□□□□□ -0.74
RLIM-202ENST00000349225 COX7CP15954 63 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms