RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 A0A1B0GV72 72 aa10.34□□□□□ -0.75
TRIM4-201ENST00000349062 K7EMT4 169 aa10.34□□□□□ -0.75
TRIM4-201ENST00000349062 PLA2G2AP14555 144 aa10.34□□□□□ -0.75
TRIM4-201ENST00000349062 LAGE3Q14657 143 aa10.34□□□□□ -0.75
TRIM4-201ENST00000349062 K7EQG2 157 aa10.33□□□□□ -0.76
TRIM4-201ENST00000349062 PSMB2P49721 201 aa10.33□□□□□ -0.76
TRIM4-201ENST00000349062 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
TRIM4-201ENST00000349062 CITED2Q99967 270 aaPredicted RBP10.33□□□□□ -0.76
TRIM4-201ENST00000349062 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
TRIM4-201ENST00000349062 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
TRIM4-201ENST00000349062 OR11H2Q8NH07 326 aa10.33□□□□□ -0.76
TRIM4-201ENST00000349062 NRACQ8N912 160 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 RASL10AQ92737 203 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 PTH2Q96A98 100 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
TRIM4-201ENST00000349062 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 IGHV3-16A0A0C4DH30 117 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 Q8N8P6 123 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 PSMG3-AS1Q96PY0 264 aa10.32□□□□□ -0.76
TRIM4-201ENST00000349062 PROK1P58294 105 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
TRIM4-201ENST00000349062 ATP5LO75964 103 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 P0DMU3 169 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 LINC01587Q99440 93 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 H7C2G1 150 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
TRIM4-201ENST00000349062 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
TRIM4-201ENST00000349062 VWFP04275 2813 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 F8W1H4 67 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 SYT8Q8NBV8 401 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 LENEPQ9Y5L5 61 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 FSHBP01225 129 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 F8P00451 2351 aa10.3□□□□□ -0.76
TRIM4-201ENST00000349062 LINC01549A6NIU2 74 aa10.29□□□□□ -0.76
TRIM4-201ENST00000349062 E9PLD3 99 aa10.29□□□□□ -0.76
TRIM4-201ENST00000349062 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
TRIM4-201ENST00000349062 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
TRIM4-201ENST00000349062 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
TRIM4-201ENST00000349062 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 KLLNB2CW77 178 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 PHLDA1Q8WV24 401 aaPredicted RBP10.28□□□□□ -0.76
TRIM4-201ENST00000349062 OPRPNQ99935 248 aaPredicted RBP10.28□□□□□ -0.76
TRIM4-201ENST00000349062 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 RBMY1A1P0DJD3 496 aaKnown RBP10.28□□□□□ -0.76
TRIM4-201ENST00000349062 RBMY1CP0DJD4 496 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 RBMY1FQ15415 496 aaKnown RBP10.28□□□□□ -0.76
TRIM4-201ENST00000349062 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
TRIM4-201ENST00000349062 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
TRIM4-201ENST00000349062 HIVEP1P15822 2718 aa10.27□□□□□ -0.76
TRIM4-201ENST00000349062 CCL24O00175 119 aa10.27□□□□□ -0.77
TRIM4-201ENST00000349062 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
TRIM4-201ENST00000349062 RRN3P1Q2M238 152 aa10.27□□□□□ -0.77
TRIM4-201ENST00000349062 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
TRIM4-201ENST00000349062 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
TRIM4-201ENST00000349062 HIGD1BQ9P298 99 aa10.27□□□□□ -0.77
TRIM4-201ENST00000349062 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
TRIM4-201ENST00000349062 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 Q9UF83 564 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 TENM1Q9UKZ4 2725 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 IGHV3-64A0A075B6Q5 118 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
TRIM4-201ENST00000349062 GEMIN7Q9H840 131 aaKnown RBP10.26□□□□□ -0.77
TRIM4-201ENST00000349062 A0A087WX48 190 aa10.25□□□□□ -0.77
TRIM4-201ENST00000349062 MRAP2Q96G30 205 aa10.25□□□□□ -0.77
TRIM4-201ENST00000349062 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
TRIM4-201ENST00000349062 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
TRIM4-201ENST00000349062 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
TRIM4-201ENST00000349062 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
TRIM4-201ENST00000349062 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
TRIM4-201ENST00000349062 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
TRIM4-201ENST00000349062 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 H7C1H1 209 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 BRI3O95415 125 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 STHQ8IWL8 128 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 LINC01006Q8NI28 216 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 FAM19A4Q96LR4 140 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 AKAP9Q99996 3911 aa10.24□□□□□ -0.77
TRIM4-201ENST00000349062 H3BMM0 161 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 MT-ATP8P03928 68 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 CRYBA4P53673 196 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms