RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CRYGDP07320 174 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
TPM3-208ENST00000341485 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 TSHBP01222 138 aa11.04□□□□□ -0.64
TPM3-208ENST00000341485 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
TPM3-208ENST00000341485 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
TPM3-208ENST00000341485 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
TPM3-208ENST00000341485 IGIPA6NJ69 53 aa11.02□□□□□ -0.64
TPM3-208ENST00000341485 M0QY20 66 aa11.02□□□□□ -0.64
TPM3-208ENST00000341485 DEFB131AP59861 70 aa11.02□□□□□ -0.64
TPM3-208ENST00000341485 ZNF56Q15929 161 aa11.02□□□□□ -0.64
TPM3-208ENST00000341485 KIR2DL4Q99706 377 aa11.02□□□□□ -0.64
TPM3-208ENST00000341485 TRBV27A0A0K0K1C4 114 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
TPM3-208ENST00000341485 UFSP1Q6NVU6 142 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 CEND1Q8N111 149 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 TM2D2Q9BX73 214 aa11.02□□□□□ -0.65
TPM3-208ENST00000341485 TRGV11A0A075B6L2 103 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 TMEM61Q8N0U2 210 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
TPM3-208ENST00000341485 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
TPM3-208ENST00000341485 A8MTW9 85 aa11□□□□□ -0.65
TPM3-208ENST00000341485 ADARB2-AS1A8MUL3 147 aa11□□□□□ -0.65
TPM3-208ENST00000341485 DEFB114Q30KQ6 69 aa11□□□□□ -0.65
TPM3-208ENST00000341485 ZNF876PQ49A33 203 aa11□□□□□ -0.65
TPM3-208ENST00000341485 HIVEP1P15822 2718 aa11□□□□□ -0.65
TPM3-208ENST00000341485 IGLV4-69A0A075B6H9 119 aa11□□□□□ -0.65
TPM3-208ENST00000341485 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
TPM3-208ENST00000341485 RBMY1BA6NDE4 496 aaKnown RBP11□□□□□ -0.65
TPM3-208ENST00000341485 RBMY1EA6NEQ0 496 aaKnown RBP11□□□□□ -0.65
TPM3-208ENST00000341485 LINC01549A6NIU2 74 aa11□□□□□ -0.65
TPM3-208ENST00000341485 K7ERJ3 54 aa11□□□□□ -0.65
TPM3-208ENST00000341485 RBMY1DP0C7P1 496 aaKnown RBP11□□□□□ -0.65
TPM3-208ENST00000341485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11□□□□□ -0.65
TPM3-208ENST00000341485 TRAV2A0A0B4J234 112 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 E9PLD3 99 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 H3BMM0 161 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 K7EP34 96 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 TAL2Q16559 108 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
TPM3-208ENST00000341485 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
TPM3-208ENST00000341485 ZNF256Q9Y2P7 627 aaPredicted RBP10.99□□□□□ -0.65
TPM3-208ENST00000341485 A0A1W2PPM0 123 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 TRPT1Q86TN4 253 aaKnown RBP10.99□□□□□ -0.65
TPM3-208ENST00000341485 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
TPM3-208ENST00000341485 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
TPM3-208ENST00000341485 CYSRT1A8MQ03 144 aa10.98□□□□□ -0.65
TPM3-208ENST00000341485 PMVKQ15126 192 aa10.98□□□□□ -0.65
TPM3-208ENST00000341485 GTF2H5Q6ZYL4 71 aa10.98□□□□□ -0.65
TPM3-208ENST00000341485 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
TPM3-208ENST00000341485 TRBV7-3A0A075B6L6 115 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 PF4P02776 101 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 SAP30O75446 220 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 EMP1P54849 157 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 RBX1P62877 108 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
TPM3-208ENST00000341485 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
TPM3-208ENST00000341485 HTN1P15515 57 aa10.96□□□□□ -0.65
TPM3-208ENST00000341485 RHOHQ15669 191 aa10.96□□□□□ -0.65
TPM3-208ENST00000341485 SAMD5Q5TGI4 173 aa10.96□□□□□ -0.65
TPM3-208ENST00000341485 PRM2P04554 102 aa10.96□□□□□ -0.66
TPM3-208ENST00000341485 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.66
TPM3-208ENST00000341485 NSD1Q96L73 2696 aaPredicted RBP10.95□□□□□ -0.66
TPM3-208ENST00000341485 P0DMU3 169 aa10.95□□□□□ -0.66
TPM3-208ENST00000341485 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
TPM3-208ENST00000341485 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
TPM3-208ENST00000341485 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
TPM3-208ENST00000341485 FLNBO75369 2602 aaKnown RBP10.95□□□□□ -0.66
TPM3-208ENST00000341485 PAPPA-AS1Q5QFB9 102 aa10.94□□□□□ -0.66
TPM3-208ENST00000341485 NF1P21359 2839 aa10.94□□□□□ -0.66
TPM3-208ENST00000341485 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
TPM3-208ENST00000341485 FABP2P12104 132 aa10.94□□□□□ -0.66
TPM3-208ENST00000341485 F8P00451 2351 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 I3L3M4 83 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 C12orf74Q32Q52 190 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 OCIAD2Q56VL3 154 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 ZNRF2Q8NHG8 242 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 PLEKHB2Q96CS7 222 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 OPRPNQ99935 248 aaPredicted RBP10.93□□□□□ -0.66
TPM3-208ENST00000341485 CBY1Q9Y3M2 126 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 BAHCC1Q9P281 2608 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
TPM3-208ENST00000341485 C20orf203Q8NBC4 194 aa10.92□□□□□ -0.66
TPM3-208ENST00000341485 IGLL5B9A064 214 aa10.91□□□□□ -0.66
TPM3-208ENST00000341485 HERVK_113P61574 105 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms