RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NHLRC2Q8NBF2 726 aa9.12□□□□□ -0.95
SIRPB3P-201ENST00000340424 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
SIRPB3P-201ENST00000340424 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
SIRPB3P-201ENST00000340424 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
SIRPB3P-201ENST00000340424 PGPEP1LA6NFU8 196 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 EVI2AP22794 236 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 CRIP1P50238 77 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 NFE4Q86UQ8 179 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SIRPB3P-201ENST00000340424 RHODO00212 210 aa9.1□□□□□ -0.95
SIRPB3P-201ENST00000340424 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
SIRPB3P-201ENST00000340424 LINC00315P59091 139 aa9.1□□□□□ -0.95
SIRPB3P-201ENST00000340424 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
SIRPB3P-201ENST00000340424 LRP1BQ9NZR2 4599 aa9.1□□□□□ -0.95
SIRPB3P-201ENST00000340424 H3BVH4 76 aa9.09□□□□□ -0.95
SIRPB3P-201ENST00000340424 PKIAP61925 76 aa9.09□□□□□ -0.95
SIRPB3P-201ENST00000340424 PHLDA3Q9Y5J5 127 aa9.09□□□□□ -0.95
SIRPB3P-201ENST00000340424 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 ARMS2P0C7Q2 107 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 WFDC10BQ8IUB3 73 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 SCRT2Q9NQ03 307 aa9.08□□□□□ -0.96
SIRPB3P-201ENST00000340424 RYR1P21817 5038 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 IGHV3-73A0A0B4J1V6 119 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 TRAV8-6A0A0B4J262 113 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 FABP4P15090 132 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 Q6ZRN7 208 aaPredicted RBP9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 MLST8Q9BVC4 326 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
SIRPB3P-201ENST00000340424 TRBV20OR9-2A0A075B6H5 130 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 IGHV3-38A0A0C4DH36 116 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 LELP1Q5T871 98 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 GTSF1LQ9H1H1 148 aa9.06□□□□□ -0.96
SIRPB3P-201ENST00000340424 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 CRYGDP07320 174 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 ESDP10768 282 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 COX19Q49B96 90 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 LBHQ53QV2 105 aaPredicted RBP9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
SIRPB3P-201ENST00000340424 TMSB15BA0A087X1C1 80 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 M0R381 172 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 LINC00694P0DN24 101 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 GZMBP10144 247 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 SPATA12Q7Z6I5 190 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 DERL1Q9BUN8 251 aa9.04□□□□□ -0.96
SIRPB3P-201ENST00000340424 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
SIRPB3P-201ENST00000340424 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
SIRPB3P-201ENST00000340424 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
SIRPB3P-201ENST00000340424 ANKRD39Q53RE8 183 aa9.03□□□□□ -0.96
SIRPB3P-201ENST00000340424 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
SIRPB3P-201ENST00000340424 HSPG2P98160 4391 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 DDTP30046 118 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 FAM74A4Q5TZK3 123 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 Q6ZSN1 163 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 OCC1Q8TAD7 63 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 TRAPPC1Q9Y5R8 145 aa9.02□□□□□ -0.97
SIRPB3P-201ENST00000340424 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 SNAI2O43623 268 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 MT-ND6P03923 174 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 RPL19P84098 196 aaKnown RBP9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 GAGE1Q13065 139 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 GAGE4Q13068 117 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 GAGE5Q13069 117 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 LAGE3Q14657 143 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 GAGE13Q4V321 117 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 CENPWQ5EE01 88 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 C14orf144Q96I85 54 aa9.01□□□□□ -0.97
SIRPB3P-201ENST00000340424 A0A087WWL8 130 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 IBA57-AS1B1ANH7 110 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 K7EN84 100 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 GNG4P50150 75 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
SIRPB3P-201ENST00000340424 RAB4BP61018 213 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 IQCJQ1A5X6 159 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 C14orf178Q8N769 122 aaPredicted RBP9□□□□□ -0.97
SIRPB3P-201ENST00000340424 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
SIRPB3P-201ENST00000340424 V9GYV3 84 aa9□□□□□ -0.97
SIRPB3P-201ENST00000340424 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms