RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 Q6YL49 198 aa10.97□□□□□ -0.65
UBA1-201ENST00000335972 NXPH4O95158 308 aa10.96□□□□□ -0.65
UBA1-201ENST00000335972 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.65
UBA1-201ENST00000335972 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
UBA1-201ENST00000335972 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
UBA1-201ENST00000335972 VCYO14598 125 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
UBA1-201ENST00000335972 C9orf85Q96MD7 179 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 IGLV4-69A0A075B6H9 119 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 IGIPA6NJ69 53 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 M0QY20 66 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
UBA1-201ENST00000335972 TMEM61Q8N0U2 210 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
UBA1-201ENST00000335972 TENM4Q6N022 2769 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 ITPR2Q14571 2701 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 IGLL5B9A064 214 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 TSPEAR-AS2P59090 65 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 ZNF843Q8N446 348 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 ZNRF2Q8NHG8 242 aa10.94□□□□□ -0.66
UBA1-201ENST00000335972 RBMY1BA6NDE4 496 aaKnown RBP10.93□□□□□ -0.66
UBA1-201ENST00000335972 RBMY1EA6NEQ0 496 aaKnown RBP10.93□□□□□ -0.66
UBA1-201ENST00000335972 RBMY1DP0C7P1 496 aaKnown RBP10.93□□□□□ -0.66
UBA1-201ENST00000335972 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
UBA1-201ENST00000335972 ZNF580Q9UK33 172 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 H3BMG7 143 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 SYT8Q8NBV8 401 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 UBE2E2Q96LR5 201 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 NOTCH2Q04721 2471 aa10.93□□□□□ -0.66
UBA1-201ENST00000335972 ELANEP08246 267 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 PPP1R17O96001 155 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 DLX4Q92988 240 aaPredicted RBP10.92□□□□□ -0.66
UBA1-201ENST00000335972 E9PLD3 99 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 APOMO95445 188 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 PMVKQ15126 192 aa10.92□□□□□ -0.66
UBA1-201ENST00000335972 J3QLI3 93 aa10.91□□□□□ -0.66
UBA1-201ENST00000335972 LGALS9O00182 355 aa10.91□□□□□ -0.66
UBA1-201ENST00000335972 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
UBA1-201ENST00000335972 SETXQ7Z333 2677 aaKnown RBP10.9□□□□□ -0.66
UBA1-201ENST00000335972 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
UBA1-201ENST00000335972 WFDC2Q14508 124 aa10.9□□□□□ -0.66
UBA1-201ENST00000335972 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
UBA1-201ENST00000335972 DEFB113Q30KQ7 82 aa10.9□□□□□ -0.66
UBA1-201ENST00000335972 Q6ZSN1 163 aa10.9□□□□□ -0.66
UBA1-201ENST00000335972 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.67
UBA1-201ENST00000335972 K7ERU9 68 aa10.9□□□□□ -0.67
UBA1-201ENST00000335972 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
UBA1-201ENST00000335972 WFDC11Q8NEX6 87 aa10.89□□□□□ -0.67
UBA1-201ENST00000335972 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
UBA1-201ENST00000335972 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 FSHBP01225 129 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
UBA1-201ENST00000335972 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
UBA1-201ENST00000335972 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 H3BMM0 161 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 XCL2Q9UBD3 114 aa10.88□□□□□ -0.67
UBA1-201ENST00000335972 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
UBA1-201ENST00000335972 LINC01619G3V211 115 aa10.87□□□□□ -0.67
UBA1-201ENST00000335972 LINC01587Q99440 93 aa10.87□□□□□ -0.67
UBA1-201ENST00000335972 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
UBA1-201ENST00000335972 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
UBA1-201ENST00000335972 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
UBA1-201ENST00000335972 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 TMEM89A2RUT3 159 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 CD28P10747 220 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 ODF3Q96PU9 254 aa10.86□□□□□ -0.67
UBA1-201ENST00000335972 TRGV11A0A075B6L2 103 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 HERVK_113P61574 105 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 MAP6D1Q9H9H5 199 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 HELZ2Q9BYK8 2649 aaKnown RBP10.85□□□□□ -0.67
UBA1-201ENST00000335972 I3L3M4 83 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 ETDBQ3ZM63 59 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 C20orf203Q8NBC4 194 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 TMEM141Q96I45 108 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 TIMM17AQ99595 171 aa10.85□□□□□ -0.67
UBA1-201ENST00000335972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.84□□□□□ -0.67
UBA1-201ENST00000335972 A0A0J9YY99 117 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 IGKV2-29A2NJV5 120 aaPredicted RBP10.84□□□□□ -0.67
UBA1-201ENST00000335972 H7C2G1 150 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 TAL2Q16559 108 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 SPXQ9BT56 116 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 A8MZ25 164 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 AZU1P20160 251 aa10.84□□□□□ -0.67
UBA1-201ENST00000335972 VCX2Q9H322 139 aa10.83□□□□□ -0.67
UBA1-201ENST00000335972 J3QQQ9 107 aa10.83□□□□□ -0.68
UBA1-201ENST00000335972 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
UBA1-201ENST00000335972 Q6ZSV7 163 aa10.83□□□□□ -0.68
UBA1-201ENST00000335972 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
UBA1-201ENST00000335972 IGLV4-3A0A075B6K6 122 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms