RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 E5RGE8 158 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 INMT-MINDY4F8WBC2 141 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM250H0YL14 139 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 H3BRM9 83 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 M0R2P5 195 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 M0R381 172 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 RHODO00212 210 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SLC17A3O00476 420 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TAX1BP3O14907 124 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SNAI2O43623 268 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SCGB1D2O95969 90 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CA1P00915 261 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1-17P01599 117 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SRP19P09132 144 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 AMTP48728 403 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 DAD1P61803 113 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SEC11AP67812 179 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CLINT1Q14677 625 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OCIAD2Q56VL3 154 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PRR27Q6MZM9 219 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF818PQ6ZRF7 136 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TRAPPC6BQ86SZ2 158 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF738Q8NE65 137 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OR51G1Q8NGK1 321 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OR51H1Q8NH63 302 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OCC1Q8TAD7 63 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ANAPC16Q96DE5 110 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C9orf85Q96MD7 179 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM147Q9BVK8 224 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 GFRA4Q9GZZ7 299 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM191AQ9H0A3 160 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ST20Q9HBF5 79 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OTORQ9NRC9 128 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 GNG12Q9UBI6 72 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PSG8Q9UQ74 426 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 NSG2Q9Y328 171 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 HSPB11Q9Y547 144 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1D-13A0A0B4J2D9 117 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TRBV6-5A0A0K0K1A5 114 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1B0GV72 72 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 K7EP34 96 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 M0R1X1 148 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ARPC5O15511 151 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SPINK1P00995 79 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGLC3P0DOY3 106 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1-13P0DP09 117 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ELK1P19419 428 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ATP6V1E1P36543 226 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CXCL5P42830 114 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SULT1A1P50225 295 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 RPL30P62888 115 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H1AQ02539 215 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SMAGPQ0VAQ4 97 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 RAB32Q13637 225 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IQCJQ1A5X6 159 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 FAM74A1Q5RGS3 127 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 UNQ5815/PRO19632Q6UWF5 114 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C19orf35Q6ZS72 473 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CYP2G1PQ6ZSU1 146 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ERASQ7Z444 233 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TBC1D26Q86UD7 250 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 ATOH7Q8N100 152 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 Q8WTZ3 238 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 SECTM1Q8WVN6 248 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PLEKHB2Q96CS7 222 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 GNPNAT1Q96EK6 184 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 COMMD5Q9GZQ3 224 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OR2D2Q9H210 308 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 GPN1Q9HCN4 374 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 RETNQ9HD89 108 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 EHFQ9NZC4 300 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CSDC2Q9Y534 153 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1W2PP11 408 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PCP4L1A6NKN8 68 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM262E9PQX1 116 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 C17orf112F2Z3M2 114 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 H3BSH0 61 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 ST8SIA3O43173 380 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 OR7C2O60412 319 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 APOMO95445 188 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H1EP10412 219 aaKnown RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FABP4P15090 132 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 NFYBP25208 207 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FCGR2CP31995 323 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 GALR1P47211 349 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 GNG10P50151 68 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 CACNG7P62955 275 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 HBG1P69891 147 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 HBG2P69892 147 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 HOXA4Q00056 320 aaPredicted RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 RAB31Q13636 194 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 GNMTQ14749 295 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 MMDQ15546 238 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 LY6EQ16553 131 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PHLDA2Q53GA4 152 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 VHLLQ6RSH7 139 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 SIGLEC15Q6ZMC9 328 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FA2HQ7L5A8 372 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms