RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CRYGDP07320 174 aa11.78□□□□□ -0.52
PDLIM1-201ENST00000329399 MGPP08493 103 aa11.78□□□□□ -0.52
PDLIM1-201ENST00000329399 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1-201ENST00000329399 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
PDLIM1-201ENST00000329399 TRBV6-5A0A0K0K1A5 114 aa11.77□□□□□ -0.52
PDLIM1-201ENST00000329399 SMKR1H3BMG3 65 aa11.77□□□□□ -0.52
PDLIM1-201ENST00000329399 RRN3P1Q2M238 152 aa11.77□□□□□ -0.52
PDLIM1-201ENST00000329399 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.52
PDLIM1-201ENST00000329399 OR11H2Q8NH07 326 aa11.77□□□□□ -0.52
PDLIM1-201ENST00000329399 IGHV1-24A0A0C4DH33 117 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 DEFB4AO15263 64 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 LEPROTL1O95214 131 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 RYR2Q92736 4967 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 F5H697 171 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
PDLIM1-201ENST00000329399 RS1O15537 224 aa11.75□□□□□ -0.53
PDLIM1-201ENST00000329399 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
PDLIM1-201ENST00000329399 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
PDLIM1-201ENST00000329399 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
PDLIM1-201ENST00000329399 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 A0A087WWL8 130 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 HBDP02042 147 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 FCER1GP30273 86 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 X6R8D5 127 aa11.74□□□□□ -0.53
PDLIM1-201ENST00000329399 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 M0QY20 66 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 VCYO14598 125 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 AZU1P20160 251 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 S100A12P80511 92 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 LAGE3Q14657 143 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 ZNF56Q15929 161 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 FAM74A4Q5TZK3 123 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 UFSP1Q6NVU6 142 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 JPT2Q9H910 190 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
PDLIM1-201ENST00000329399 GATA1P15976 413 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 CFAP126Q5VTH2 177 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 Q8NAQ8 132 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 HYDINQ4G0P3 5121 aa11.72□□□□□ -0.53
PDLIM1-201ENST00000329399 SCGB1D1O95968 90 aa11.71□□□□□ -0.53
PDLIM1-201ENST00000329399 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
PDLIM1-201ENST00000329399 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
PDLIM1-201ENST00000329399 TRAV4A0A0B4J268 109 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 C20orf202A1L168 122 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 KRTDAPP60985 99 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 PMCHL1Q16048 86 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 IGHV4-28A0A0C4DH34 117 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 C3orf79P0CE67 100 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 OR4C5Q8NGB2 326 aa11.7□□□□□ -0.54
PDLIM1-201ENST00000329399 PRM2P04554 102 aa11.69□□□□□ -0.54
PDLIM1-201ENST00000329399 RPL39LQ96EH5 51 aaKnown RBP11.69□□□□□ -0.54
PDLIM1-201ENST00000329399 C18orf15Q96N68 181 aa11.69□□□□□ -0.54
PDLIM1-201ENST00000329399 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
PDLIM1-201ENST00000329399 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
PDLIM1-201ENST00000329399 ATP5LO75964 103 aa11.68□□□□□ -0.54
PDLIM1-201ENST00000329399 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
PDLIM1-201ENST00000329399 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
PDLIM1-201ENST00000329399 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
PDLIM1-201ENST00000329399 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
PDLIM1-201ENST00000329399 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-201ENST00000329399 TNFRSF18Q9Y5U5 241 aa11.67□□□□□ -0.54
PDLIM1-201ENST00000329399 A0A096LNJ9 63 aa11.66□□□□□ -0.54
PDLIM1-201ENST00000329399 MIFP14174 115 aa11.66□□□□□ -0.54
PDLIM1-201ENST00000329399 RHOHQ15669 191 aa11.66□□□□□ -0.54
PDLIM1-201ENST00000329399 C11orf68Q9H3H3 251 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-201ENST00000329399 KMT2AQ03164 3969 aa11.66□□□□□ -0.54
PDLIM1-201ENST00000329399 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 LYRM9A8MSI8 78 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 I3L3M4 83 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 NUDT3O95989 172 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
PDLIM1-201ENST00000329399 LINC00612Q8N6U2 182 aa11.64□□□□□ -0.55
PDLIM1-201ENST00000329399 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
PDLIM1-201ENST00000329399 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
PDLIM1-201ENST00000329399 Q6ZTI0 123 aa11.63□□□□□ -0.55
PDLIM1-201ENST00000329399 TOMM6Q96B49 74 aa11.63□□□□□ -0.55
PDLIM1-201ENST00000329399 TEX48A0A1B0GUV7 120 aa11.63□□□□□ -0.55
PDLIM1-201ENST00000329399 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
PDLIM1-201ENST00000329399 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
PDLIM1-201ENST00000329399 LGALS9CQ6DKI2 356 aa11.62□□□□□ -0.55
PDLIM1-201ENST00000329399 Q8N976 141 aa11.62□□□□□ -0.55
PDLIM1-201ENST00000329399 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1-201ENST00000329399 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms