RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 DCANP1Q8TF63 244 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 A0A087WW49 117 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 H3BUA1 57 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 TNFRSF18Q9Y5U5 241 aa9.61□□□□□ -0.87
HMGCS1-201ENST00000325110 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 TSHBP01222 138 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 CRYGDP07320 174 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 TCTEX1D4Q5JR98 221 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 KLLNB2CW77 178 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 TSPAN13O95857 204 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 PROK1P58294 105 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 TSPEAR-AS2P59090 65 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 A0A0J9YX75 114 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 ZNRF2Q8NHG8 242 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 DYNLRB2Q8TF09 96 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
HMGCS1-201ENST00000325110 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-201ENST00000325110 SLURP1P55000 103 aa9.59□□□□□ -0.87
HMGCS1-201ENST00000325110 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-201ENST00000325110 TMEM141Q96I45 108 aa9.59□□□□□ -0.87
HMGCS1-201ENST00000325110 A0A0J9YY99 117 aa9.59□□□□□ -0.88
HMGCS1-201ENST00000325110 MED14OSP0DP75 135 aa9.59□□□□□ -0.88
HMGCS1-201ENST00000325110 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 IGLV4-69A0A075B6H9 119 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 CIDEAO60543 219 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 IGLV1-40P01703 118 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 LINC01587Q99440 93 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 ZNF580Q9UK33 172 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 A4D1N5 150 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 LINC00315P59091 139 aa9.58□□□□□ -0.88
HMGCS1-201ENST00000325110 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
HMGCS1-201ENST00000325110 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
HMGCS1-201ENST00000325110 VPS13CQ709C8 3753 aa9.57□□□□□ -0.88
HMGCS1-201ENST00000325110 C9JAW5 83 aa9.57□□□□□ -0.88
HMGCS1-201ENST00000325110 I3L3M4 83 aa9.57□□□□□ -0.88
HMGCS1-201ENST00000325110 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 M0QY20 66 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 PRB1P04280 392 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 CRIP2P52943 208 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 NDUFA11Q86Y39 141 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 A8MWV9 139 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 K7EMT4 169 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 PSMB8P28062 276 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
HMGCS1-201ENST00000325110 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 K7EQG2 157 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 TCL1BO95988 128 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 LINC01356Q8N9X3 169 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 KLK9Q2XQG4 91 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
HMGCS1-201ENST00000325110 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 A8MZ25 164 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 TEX15Q9BXT5 2789 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 TRBV27A0A0K0K1C4 114 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 CFC1P0CG37 223 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 FAM19A4Q96LR4 140 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 XCL2Q9UBD3 114 aa9.54□□□□□ -0.88
HMGCS1-201ENST00000325110 C10orf126Q8N4M7 172 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 PRORYQ9H606 182 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 LGALS9O00182 355 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 FOXI1Q12951 378 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 COX6B1P14854 86 aa9.53□□□□□ -0.88
HMGCS1-201ENST00000325110 Q5PR19 223 aa9.52□□□□□ -0.88
HMGCS1-201ENST00000325110 DAND5Q8N907 189 aa9.52□□□□□ -0.88
HMGCS1-201ENST00000325110 C1QTNF4Q9BXJ3 329 aa9.52□□□□□ -0.88
HMGCS1-201ENST00000325110 Q9UF83 564 aa9.52□□□□□ -0.88
HMGCS1-201ENST00000325110 CSMD2Q7Z408 3487 aa9.52□□□□□ -0.89
HMGCS1-201ENST00000325110 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
HMGCS1-201ENST00000325110 RHODO00212 210 aa9.52□□□□□ -0.89
HMGCS1-201ENST00000325110 ZNF22P17026 224 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-201ENST00000325110 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
HMGCS1-201ENST00000325110 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms