RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 GPHB5Q86YW7 130 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 VCX2Q9H322 139 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 RHODO00212 210 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 HTN1P15515 57 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 NDUFA11Q86Y39 141 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 CUBNO60494 3623 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 IGHV1-69DA0A0B4J2H0 117 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 IGHV1-69P01742 117 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 FAM110AQ9BQ89 295 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 USP24Q9UPU5 2620 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 TEX49A0A1B0GTD5 131 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 Q6ZS46 218 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 U3KQE9 123 aa9.08□□□□□ -0.96
NLRC3-201ENST00000324659 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 HIST2H2BDQ6DRA6 164 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
NLRC3-201ENST00000324659 HIVEP2P31629 2446 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 TRAV12-1A0A0B4J245 112 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
NLRC3-201ENST00000324659 ZNF256Q9Y2P7 627 aaPredicted RBP9.07□□□□□ -0.96
NLRC3-201ENST00000324659 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 RNASE3P12724 160 aaKnown RBP9.06□□□□□ -0.96
NLRC3-201ENST00000324659 BRI3O95415 125 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 UBE2D3P61077 147 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 UBE2D2P62837 147 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 JMJD1CQ15652 2540 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 CFC1P0CG37 223 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 COX6B1P14854 86 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 Q8N1Y9 231 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
NLRC3-201ENST00000324659 MSMBP08118 114 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 UBE2D1P51668 147 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 CD7P09564 240 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 ZNF56Q15929 161 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 C11orf44Q8N8P7 122 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
NLRC3-201ENST00000324659 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
NLRC3-201ENST00000324659 FN1P02751 2386 aaKnown RBP9.05□□□□□ -0.96
NLRC3-201ENST00000324659 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
NLRC3-201ENST00000324659 OVOL1O14753 267 aa9.04□□□□□ -0.96
NLRC3-201ENST00000324659 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 CRYGDP07320 174 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 PRSS2P07478 247 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 HERVK_113P61574 105 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 A4D1N5 150 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 TSHBP01222 138 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 C10orf105Q8TEF2 133 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 AVPP01185 164 aa9.03□□□□□ -0.96
NLRC3-201ENST00000324659 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.96
NLRC3-201ENST00000324659 A0A0J9YY99 117 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 SDHAF1A6NFY7 115 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 NDUFA4O00483 81 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 SOCS3O14543 225 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 B4DSR2 109 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 MRPL23Q16540 153 aaKnown RBP9.02□□□□□ -0.97
NLRC3-201ENST00000324659 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.97
NLRC3-201ENST00000324659 TEX15Q9BXT5 2789 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 M0QXV9 152 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 LGALS3P17931 250 aaKnown RBP9.01□□□□□ -0.97
NLRC3-201ENST00000324659 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 KLK9Q9UKQ9 250 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 NPC2P61916 151 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 DEFB112Q30KQ8 113 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 HIST2H2BCQ6DN03 193 aa9.01□□□□□ -0.97
NLRC3-201ENST00000324659 PMVKQ15126 192 aa9□□□□□ -0.97
NLRC3-201ENST00000324659 C2orf82Q6UX34 121 aa9□□□□□ -0.97
NLRC3-201ENST00000324659 HECTD1Q9ULT8 2610 aa9□□□□□ -0.97
NLRC3-201ENST00000324659 ELANEP08246 267 aa9□□□□□ -0.97
NLRC3-201ENST00000324659 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
NLRC3-201ENST00000324659 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
NLRC3-201ENST00000324659 ADARB2-AS1A8MUL3 147 aa8.99□□□□□ -0.97
NLRC3-201ENST00000324659 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
NLRC3-201ENST00000324659 LINC00315P59091 139 aa8.99□□□□□ -0.97
NLRC3-201ENST00000324659 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
NLRC3-201ENST00000324659 H3BMM0 161 aa8.98□□□□□ -0.97
NLRC3-201ENST00000324659 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
NLRC3-201ENST00000324659 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms