RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 NEGR1Q7Z3B1 354 aa11.01□□□□□ -0.65
CHFR-202ENST00000315585 CSMD2Q7Z408 3487 aa11.01□□□□□ -0.65
CHFR-202ENST00000315585 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
CHFR-202ENST00000315585 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
CHFR-202ENST00000315585 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
CHFR-202ENST00000315585 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
CHFR-202ENST00000315585 MAP1AP78559 2803 aaPredicted RBP11.01□□□□□ -0.65
CHFR-202ENST00000315585 A8MTW9 85 aa11□□□□□ -0.65
CHFR-202ENST00000315585 IGLL5B9A064 214 aa11□□□□□ -0.65
CHFR-202ENST00000315585 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
CHFR-202ENST00000315585 A8MWV9 139 aa11□□□□□ -0.65
CHFR-202ENST00000315585 TSHBP01222 138 aa11□□□□□ -0.65
CHFR-202ENST00000315585 PTH2Q96A98 100 aa11□□□□□ -0.65
CHFR-202ENST00000315585 IGLV4-69A0A075B6H9 119 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 PCP4P48539 62 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 CELSR1Q9NYQ6 3014 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 F8W1H4 67 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 DEFB131AP59861 70 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
CHFR-202ENST00000315585 C16orf95Q9H693 158 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 ITPR3Q14573 2671 aa10.99□□□□□ -0.65
CHFR-202ENST00000315585 K7ERJ3 54 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
CHFR-202ENST00000315585 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 H3BMM0 161 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 CRYBA4P53673 196 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 C20orf203Q8NBC4 194 aa10.98□□□□□ -0.65
CHFR-202ENST00000315585 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
CHFR-202ENST00000315585 M0R2P5 195 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 SLURP1P55000 103 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 HILS1P60008 231 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 LYRM7Q5U5X0 104 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 RAX2Q96IS3 184 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
CHFR-202ENST00000315585 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
CHFR-202ENST00000315585 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.65
CHFR-202ENST00000315585 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
CHFR-202ENST00000315585 VCX2Q9H322 139 aa10.96□□□□□ -0.65
CHFR-202ENST00000315585 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
CHFR-202ENST00000315585 ZANQ9Y493 2812 aa10.96□□□□□ -0.66
CHFR-202ENST00000315585 RHODO00212 210 aa10.96□□□□□ -0.66
CHFR-202ENST00000315585 LGALS3P17931 250 aaKnown RBP10.96□□□□□ -0.66
CHFR-202ENST00000315585 DEFB136Q30KP8 78 aa10.96□□□□□ -0.66
CHFR-202ENST00000315585 MORN3Q6PF18 240 aaPredicted RBP10.96□□□□□ -0.66
CHFR-202ENST00000315585 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.66
CHFR-202ENST00000315585 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.66
CHFR-202ENST00000315585 PDZD2O15018 2839 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 SPXQ9BT56 116 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 G3V4G9 280 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 J3QR89 54 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
CHFR-202ENST00000315585 TRAV25A0A0B4J276 109 aa10.94□□□□□ -0.66
CHFR-202ENST00000315585 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
CHFR-202ENST00000315585 A0A0J9YY99 117 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 J3QQQ9 107 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 LEPROTO15243 131 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 NDUFA7O95182 113 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 HTN1P15515 57 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 PLEKHB2Q96CS7 222 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
CHFR-202ENST00000315585 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
CHFR-202ENST00000315585 CCDC168Q8NDH2 2452 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 LY6G6DO95868 133 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 INSP01308 110 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 P0DMU3 169 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 FAM231AP0DMU4 169 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 FAM231CP0DMU5 169 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 DLX4Q92988 240 aaPredicted RBP10.92□□□□□ -0.66
CHFR-202ENST00000315585 AGRNO00468 2067 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 UBE2D1P51668 147 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 EMP1P54849 157 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 DEFB114Q30KQ6 69 aa10.92□□□□□ -0.66
CHFR-202ENST00000315585 ZFHX3Q15911 3703 aa10.91□□□□□ -0.66
CHFR-202ENST00000315585 LINC01587Q99440 93 aa10.91□□□□□ -0.66
CHFR-202ENST00000315585 MAP6D1Q9H9H5 199 aa10.91□□□□□ -0.66
CHFR-202ENST00000315585 FLNAP21333 2647 aaKnown RBP10.91□□□□□ -0.66
CHFR-202ENST00000315585 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 PGPEP1Q9NXJ5 209 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 UNC79Q9P2D8 2635 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
CHFR-202ENST00000315585 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 CD28P10747 220 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 RPL24P83731 157 aaKnown RBP10.9□□□□□ -0.66
CHFR-202ENST00000315585 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
CHFR-202ENST00000315585 GAGE13Q4V321 117 aa10.9□□□□□ -0.66
CHFR-202ENST00000315585 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
CHFR-202ENST00000315585 CCL24O00175 119 aa10.89□□□□□ -0.67
CHFR-202ENST00000315585 SAP30O75446 220 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms