RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR8A1Q8NGG7 326 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 TRAV41A0A0B4J266 112 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 GNG7O60262 68 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 DUSP14O95147 198 aaKnown RBP5.6□□□□□ -1.51
CNOT4-201ENST00000315544 USMG5Q96IX5 58 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 SPTBN1Q01082 2364 aaKnown RBP5.6□□□□□ -1.51
CNOT4-201ENST00000315544 INAFM1C9JVW0 142 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 CSN1S1P47710 185 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 NDUFA11Q86Y39 141 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 RYR3Q15413 4870 aa5.59□□□□□ -1.51
CNOT4-201ENST00000315544 PROK1P58294 105 aa5.59□□□□□ -1.51
CNOT4-201ENST00000315544 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.51
CNOT4-201ENST00000315544 SPRY2O43597 315 aa5.59□□□□□ -1.51
CNOT4-201ENST00000315544 CITED2Q99967 270 aaPredicted RBP5.59□□□□□ -1.51
CNOT4-201ENST00000315544 NOTCH2Q04721 2471 aa5.59□□□□□ -1.52
CNOT4-201ENST00000315544 TEX48A0A1B0GUV7 120 aa5.59□□□□□ -1.52
CNOT4-201ENST00000315544 F6UB75 175 aa5.59□□□□□ -1.52
CNOT4-201ENST00000315544 F8W1H4 67 aa5.59□□□□□ -1.52
CNOT4-201ENST00000315544 FLNAP21333 2647 aaKnown RBP5.58□□□□□ -1.52
CNOT4-201ENST00000315544 IGLV4-3A0A075B6K6 122 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 DPM2O94777 84 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 WFDC2Q14508 124 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 SS18Q15532 418 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 ADAMTSL4-AS1Q5T5F5 129 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 ZC2HC1BQ5TFG8 222 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 CLEC19AQ6UXS0 136 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 CHTOPQ9Y3Y2 248 aaKnown RBP5.58□□□□□ -1.52
CNOT4-201ENST00000315544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.58□□□□□ -1.52
CNOT4-201ENST00000315544 SPANXDQ9BXN6 97 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 SPANXCQ9NY87 97 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 THYN1Q9P016 225 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 FASNP49327 2511 aaKnown RBP5.58□□□□□ -1.52
CNOT4-201ENST00000315544 H7C1H1 209 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 RPL13AP40429 203 aaKnown RBP5.58□□□□□ -1.52
CNOT4-201ENST00000315544 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
CNOT4-201ENST00000315544 H3BMG7 143 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 TWIST1Q15672 202 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 SHISA2Q6UWI4 295 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 ZNF418Q8TF45 676 aaPredicted RBP5.57□□□□□ -1.52
CNOT4-201ENST00000315544 EEF1AKMT3Q96AZ1 226 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 MAP1LC3AQ9H492 121 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 HECTD1Q9ULT8 2610 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 HYDINQ4G0P3 5121 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 LOC100131303A0A0U1RQF7 123 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
CNOT4-201ENST00000315544 DPH3P1Q9H4G8 78 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 PKDREJQ9NTG1 2253 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 VPS13BQ7Z7G8 4022 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 MAST4O15021 2626 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 TMEM238C9JI98 176 aa5.57□□□□□ -1.52
CNOT4-201ENST00000315544 CKS2P33552 79 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 PCP4P48539 62 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 GTSCR1Q86UQ5 136 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 DNAH5Q8TE73 4624 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 SDHAF1A6NFY7 115 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 TM4SF20Q53R12 229 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 PKD1L1Q8TDX9 2849 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 ROS1P08922 2347 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 A0A0B4J2C4 111 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 RPL39P62891 51 aaKnown RBP5.56□□□□□ -1.52
CNOT4-201ENST00000315544 EGFEM1PQ0D2K5 195 aa5.56□□□□□ -1.52
CNOT4-201ENST00000315544 IGHV3OR16-8A0A075B7F1 116 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 DNAJC9-AS1A6NH13 148 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 AAMDCQ9H7C9 122 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 CBY1Q9Y3M2 126 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
CNOT4-201ENST00000315544 IGHV3-33P01772 117 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 SRD5A1P18405 259 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 SAMD5Q5TGI4 173 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 C18orf65Q6ZTR6 163 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 DAZAP1Q96EP5 407 aaKnown RBP5.55□□□□□ -1.52
CNOT4-201ENST00000315544 C2orf66Q6UXQ4 117 aa5.55□□□□□ -1.52
CNOT4-201ENST00000315544 IGHV1OR15-1A0A075B7D0 117 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 TMEM219Q86XT9 240 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 DYNLRB1Q9NP97 96 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 H3BUT2 72 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 H3BVH4 76 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 HIST1H4AP62805 103 aaKnown RBP5.54□□□□□ -1.52
CNOT4-201ENST00000315544 SOSTDC1Q6X4U4 206 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 FN1P02751 2386 aaKnown RBP5.54□□□□□ -1.52
CNOT4-201ENST00000315544 RHOHQ15669 191 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 TMEM141Q96I45 108 aa5.54□□□□□ -1.52
CNOT4-201ENST00000315544 TCL1BO95988 128 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 FA2HQ7L5A8 372 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 WFDC9Q8NEX5 89 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 PRADC1Q9BSG0 188 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 K7EQM0 130 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 ORMDL2Q53FV1 153 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 WFDC3Q8IUB2 231 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 PRSS3P2Q8NHM4 247 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 METTL26Q96S19 204 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 DAZ1Q9NQZ3 744 aaKnown RBP5.53□□□□□ -1.52
CNOT4-201ENST00000315544 TRAV21A0A0B4J279 112 aa5.53□□□□□ -1.52
CNOT4-201ENST00000315544 TIMM17BO60830 172 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms