RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 LINC00173Q6ZV60 143 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 IGLV2-18A0A075B6J9 118 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 A8MWV9 139 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 F5H697 171 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 RS1O15537 224 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 LINC00614P0C842 121 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 JOSD1Q15040 202 aaPredicted RBP4.98□□□□□ -1.61
PTCD2-201ENST00000308077 Q8N976 141 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 CHCHD1Q96BP2 118 aaKnown RBP4.98□□□□□ -1.61
PTCD2-201ENST00000308077 OVOL2Q9BRP0 275 aa4.98□□□□□ -1.61
PTCD2-201ENST00000308077 ZMAT5Q9UDW3 170 aaKnown RBP4.98□□□□□ -1.61
PTCD2-201ENST00000308077 PRSS47A8MTI9 375 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 M0QY20 66 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 PRB2P02812 416 aaPredicted RBP4.97□□□□□ -1.61
PTCD2-201ENST00000308077 AMTP48728 403 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 Q6ZSN1 163 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 SPATA12Q7Z6I5 190 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 NDUFAF3Q9BU61 184 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 MAP1LC3AQ9H492 121 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 IGHV1-24A0A0C4DH33 117 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 SMIM9A6NGZ8 99 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 HSBP1O75506 76 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 EMP1P54849 157 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 FA2HQ7L5A8 372 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 OR11H2Q8NH07 326 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 RNF183Q96D59 192 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 ZNF479Q96JC4 524 aa4.97□□□□□ -1.61
PTCD2-201ENST00000308077 A0A096LNJ9 63 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 GAGE12BA1L429 117 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 LINC01546A6NGU7 62 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 GAGE7O76087 117 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 GAGE12FP0CL80 117 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 GAGE12GP0CL81 117 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 GAGE12IP0CL82 117 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 P0DMU3 169 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 FAM231AP0DMU4 169 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 FAM231CP0DMU5 169 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 SUMO2P61956 95 aaKnown RBP4.96□□□□□ -1.62
PTCD2-201ENST00000308077 KPRPQ5T749 579 aaPredicted RBP4.96□□□□□ -1.62
PTCD2-201ENST00000308077 Q8NAQ8 132 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 EDA2RQ9HAV5 297 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 AP5S1Q9NUS5 200 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 Q9UF83 564 aa4.96□□□□□ -1.62
PTCD2-201ENST00000308077 TRAV4A0A0B4J268 109 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 RHODO00212 210 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 DEFB4AO15263 64 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 IGHV3-53P01767 116 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 TNP2Q05952 138 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 ZFP2Q6ZN57 461 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 LINC00612Q8N6U2 182 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 Q8N8P6 123 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 OR4C5Q8NGB2 326 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 C20orf78Q9BR46 151 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 RETNQ9HD89 108 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 NXT2Q9NPJ8 142 aaKnown RBP4.95□□□□□ -1.62
PTCD2-201ENST00000308077 TRBV6-5A0A0K0K1A5 114 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 K7EIL1 84 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 GHRHP01286 108 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 C3orf79P0CE67 100 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 POLR2KP53803 58 aaKnown RBP4.95□□□□□ -1.62
PTCD2-201ENST00000308077 KRTDAPP60985 99 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 NEGR1Q7Z3B1 354 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
PTCD2-201ENST00000308077 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 TCAPO15273 167 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 SCGB1D1O95968 90 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 PPP1R17O96001 155 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 MIFP14174 115 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 TMEM70Q9BUB7 260 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 ST20Q9HBF5 79 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 TRGV2A0A075B6R0 118 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 SDHAF1A6NFY7 115 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 RPL32P62910 135 aaKnown RBP4.94□□□□□ -1.62
PTCD2-201ENST00000308077 FAM222AQ5U5X8 452 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 NEXN-AS1Q8NBZ9 246 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 DEFB104AQ8WTQ1 72 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 WWC2-AS2Q96NR7 200 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 CELA1Q9UNI1 258 aa4.94□□□□□ -1.62
PTCD2-201ENST00000308077 LCE6AA0A183 80 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 H7C1H1 209 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 DEFB130BP0DP73 79 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 DEFB130AP0DP74 79 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 ZNF664Q8N3J9 261 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 DKK2Q9UBU2 259 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 TP53TG1Q9Y2A0 90 aa4.93□□□□□ -1.62
PTCD2-201ENST00000308077 TRBV27A0A0K0K1C4 114 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 LYRM9A8MSI8 78 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 HBDP02042 147 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 FCER1GP30273 86 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 FHL2Q14192 279 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 LAGE3Q14657 143 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 C18orf15Q96N68 181 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms