RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GNG5P63218 68 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 TCL1BO95988 128 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 TP53TG3Q9ULZ0 132 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 HHLA3Q9XRX5 114 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 CRIP2P52943 208 aaPredicted RBP3.1□□□□□ -1.91
USH2A-201ENST00000307340 A0A1B0GUV1 79 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 ODF3BA8MYP8 253 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 ZNF726P1Q15940 193 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 DIRC1Q969H9 104 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 IGKV3-7A0A075B6H7 116 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 hDV102S1A0JD36 115 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 TMEM105Q8N8V8 129 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 PRSS29PA6NIE9 313 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 TCF15Q12870 199 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3-53P01767 116 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 OVOL3O00110 214 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 ZNRD1Q9P1U0 126 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 FGF23Q9GZV9 251 aaPredicted RBP3.1□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3OR16-12A0A075B7B8 117 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 LY6G6EA0A0G2JKS1 128 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 NEXN-AS1Q8NBZ9 246 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 U3KQA8 63 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 TRAV13-1A0A0B4J241 112 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 C20orf203Q8NBC4 194 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 LINC01560Q8TB33 94 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 BDP1A6H8Y1 2624 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 BAALCQ8WXS3 180 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 IGHV7-81A0A0B4J1V7 117 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
USH2A-201ENST00000307340 SUMO4Q6EEV6 95 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 COX7B2Q8TF08 81 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 BAALC-AS2P0C853 105 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 HIGD2AQ9BW72 106 aa3.09□□□□□ -1.91
USH2A-201ENST00000307340 H3BNG1 76 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 IGKV1-39P01597 117 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 IGLV2-14P01704 120 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 IGKV1D-39P04432 117 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 NREPQ16612 68 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 SP5Q6BEB4 398 aaPredicted RBP3.09□□□□□ -1.92
USH2A-201ENST00000307340 Q9H8V8 135 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.92
USH2A-201ENST00000307340 C11orf53Q8IXP5 236 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 LEAP2Q969E1 77 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 CYYR1Q96J86 154 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 KLLNB2CW77 178 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 GPR179Q6PRD1 2367 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 CENPFP49454 3210 aa3.09□□□□□ -1.92
USH2A-201ENST00000307340 A0A0G2JRQ6 117 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
USH2A-201ENST00000307340 RNASE1P07998 156 aaKnown RBP3.08□□□□□ -1.92
USH2A-201ENST00000307340 FAM215AQ9Y5M1 114 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 C2orf70A6NJV1 201 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 Q6ZR03 302 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 H3BPC8 53 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 IGLC6P0CF74 106 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 DIAPH2-AS1Q14236 149 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 DYNAPQ8N1N2 210 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 NHLRC4P0CG21 123 aaPredicted RBP3.08□□□□□ -1.92
USH2A-201ENST00000307340 EPOPA6NHQ4 379 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 CFHR3Q02985 330 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 CXCL6P80162 114 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 IGHV3-21A0A0B4J1V1 117 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 DEFB131AP59861 70 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 Q8N9W7 124 aa3.08□□□□□ -1.92
USH2A-201ENST00000307340 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 LINC00482Q8N8I6 264 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 ODF3L1Q8IXM7 274 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 GNLYP22749 145 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 FXYD7P58549 80 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 PSMG3-AS1Q96PY0 264 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 LAMA2P24043 3122 aaKnown RBP3.07□□□□□ -1.92
USH2A-201ENST00000307340 ZNF22P17026 224 aaPredicted RBP3.07□□□□□ -1.92
USH2A-201ENST00000307340 NXPH4O95158 308 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 U3KQE9 123 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 LY6EQ16553 131 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 TP53AIP1Q9HCN2 124 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 SYNJ2BPP57105 145 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 UBE2DNLQ8IWF7 75 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 ANGP03950 147 aaKnown RBP3.07□□□□□ -1.92
USH2A-201ENST00000307340 UBE2D2P62837 147 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 C4orf48Q5BLP8 95 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 IGLV2-23P01705 113 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 Q6ZUT4 128 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 GPHA2Q96T91 129 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 C3orf56Q8N813 242 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 ZNRF2Q8NHG8 242 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 PSMB8P28062 276 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 AGPAT4-IT1Q9H0P7 198 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 LOC107984640A0A0U1RRK4 108 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 PROP1O75360 226 aa3.07□□□□□ -1.92
USH2A-201ENST00000307340 Q6JHZ5 121 aa3.06□□□□□ -1.92
USH2A-201ENST00000307340 Q8IZM0 81 aa3.06□□□□□ -1.92
USH2A-201ENST00000307340 LY6LH3BQJ8 138 aa3.06□□□□□ -1.92
USH2A-201ENST00000307340 KLK9Q2XQG4 91 aa3.06□□□□□ -1.92
USH2A-201ENST00000307340 KLK9Q9UKQ9 250 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms