RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RPL32P62910 135 aaKnown RBP12.53□□□□□ -0.4
KRT28-201ENST00000306658 PMCHL1Q16048 86 aa12.53□□□□□ -0.4
KRT28-201ENST00000306658 KPRPQ5T749 579 aaPredicted RBP12.53□□□□□ -0.4
KRT28-201ENST00000306658 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
KRT28-201ENST00000306658 ZNF479Q96JC4 524 aa12.52□□□□□ -0.4
KRT28-201ENST00000306658 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
KRT28-201ENST00000306658 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 K7EMI3 77 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 SDHAF1A6NFY7 115 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 VCYO14598 125 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
KRT28-201ENST00000306658 Q6ZSN1 163 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
KRT28-201ENST00000306658 LEPROTL1O95214 131 aa12.5□□□□□ -0.41
KRT28-201ENST00000306658 LAGE3Q14657 143 aa12.5□□□□□ -0.41
KRT28-201ENST00000306658 LINC00612Q8N6U2 182 aa12.5□□□□□ -0.41
KRT28-201ENST00000306658 Q8NAQ8 132 aa12.5□□□□□ -0.41
KRT28-201ENST00000306658 C18orf15Q96N68 181 aa12.5□□□□□ -0.41
KRT28-201ENST00000306658 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
KRT28-201ENST00000306658 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
KRT28-201ENST00000306658 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
KRT28-201ENST00000306658 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
KRT28-201ENST00000306658 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 TCAPO15273 167 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 HBDP02042 147 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 PRB2P02812 416 aaPredicted RBP12.48□□□□□ -0.41
KRT28-201ENST00000306658 FCER1GP30273 86 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
KRT28-201ENST00000306658 DEFB4AO15263 64 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 SMIM6P0DI80 62 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 P0DMU3 169 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 DKK2Q9UBU2 259 aa12.47□□□□□ -0.41
KRT28-201ENST00000306658 A0A096LNJ9 63 aa12.46□□□□□ -0.41
KRT28-201ENST00000306658 TRGV4A0A0C4DH28 118 aa12.46□□□□□ -0.41
KRT28-201ENST00000306658 K7EIL1 84 aa12.46□□□□□ -0.41
KRT28-201ENST00000306658 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 I3L3M4 83 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 K7EQD1 137 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 KRTDAPP60985 99 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 JOSD1Q15040 202 aaPredicted RBP12.45□□□□□ -0.42
KRT28-201ENST00000306658 DEFB121Q5J5C9 76 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 NEXN-AS1Q8NBZ9 246 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 TRBV6-4A0A1B0GX49 114 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 NUDT3O95989 172 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 SPART-AS1P0CW21 52 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 G0S2P27469 103 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 PYY3Q5JQD4 70 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
KRT28-201ENST00000306658 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
KRT28-201ENST00000306658 BTF3P20290 206 aaKnown RBP12.44□□□□□ -0.42
KRT28-201ENST00000306658 C3orf79P0CE67 100 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 DAD1P61803 113 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 RPL36AP83881 106 aaKnown RBP12.43□□□□□ -0.42
KRT28-201ENST00000306658 FHL2Q14192 279 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 KRTAP21-3Q3LHN1 58 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 LINC00518Q8N0U6 118 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 RPL36ALQ969Q0 106 aaKnown RBP12.43□□□□□ -0.42
KRT28-201ENST00000306658 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 RETNQ9HD89 108 aa12.43□□□□□ -0.42
KRT28-201ENST00000306658 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
KRT28-201ENST00000306658 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
KRT28-201ENST00000306658 SBSPONQ8IVN8 264 aa12.42□□□□□ -0.42
KRT28-201ENST00000306658 Q9UF83 564 aa12.42□□□□□ -0.42
KRT28-201ENST00000306658 LINC01549A6NIU2 74 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 RHOHQ15669 191 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 LINC00173Q6ZV60 143 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 C12orf57Q99622 126 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
KRT28-201ENST00000306658 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
KRT28-201ENST00000306658 CELA1Q9UNI1 258 aa12.4□□□□□ -0.42
KRT28-201ENST00000306658 TSHBP01222 138 aa12.39□□□□□ -0.43
KRT28-201ENST00000306658 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
KRT28-201ENST00000306658 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
KRT28-201ENST00000306658 SYS1-DBNDD2H3BUS1 97 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 ATP5LO75964 103 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 ATP5G1P05496 136 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 C2orf66Q6UXQ4 117 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 IFI27L1Q96BM0 104 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 DAZ4Q86SG3 579 aaKnown RBP12.38□□□□□ -0.43
KRT28-201ENST00000306658 DAZ3Q9NR90 486 aaKnown RBP12.38□□□□□ -0.43
KRT28-201ENST00000306658 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
KRT28-201ENST00000306658 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 GAGE1Q13065 139 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 GAGE4Q13068 117 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 GAGE5Q13069 117 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 COTL1Q14019 142 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
KRT28-201ENST00000306658 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms