RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 IGKV2-24A0A0C4DH68 120 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 C10orf105Q8TEF2 133 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 A0A0J9YXV3 536 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 SNURFQ9Y675 71 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 WDR87Q6ZQQ6 2873 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
TRIM56-201ENST00000306085 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 Q6ZS49 121 aa10.49□□□□□ -0.73
TRIM56-201ENST00000306085 UQCRQO14949 82 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 PIK3CD-AS1Q5SR53 167 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 SP5Q6BEB4 398 aaPredicted RBP10.48□□□□□ -0.73
TRIM56-201ENST00000306085 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 WT1-ASQ06250 92 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 PTH2Q96A98 100 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
TRIM56-201ENST00000306085 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
TRIM56-201ENST00000306085 SLURP1P55000 103 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 TMEM105Q8N8V8 129 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 BRWD3Q6RI45 1802 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 POLQO75417 2590 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 TIMM17BO60830 172 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 DEFB4AO15263 64 aa10.47□□□□□ -0.73
TRIM56-201ENST00000306085 NCOR2Q9Y618 2525 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 LINC00173Q6ZV60 143 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 IGLC6P0CF74 106 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 C16orf54Q6UWD8 224 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 SERP2Q8N6R1 65 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 KLK12Q9UKR0 248 aa10.46□□□□□ -0.73
TRIM56-201ENST00000306085 FN1P02751 2386 aaKnown RBP10.46□□□□□ -0.74
TRIM56-201ENST00000306085 H3BT86 120 aa10.46□□□□□ -0.74
TRIM56-201ENST00000306085 IGHV4-38-2P0DP08 117 aa10.46□□□□□ -0.74
TRIM56-201ENST00000306085 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
TRIM56-201ENST00000306085 IGHV4-61A0A0C4DH41 118 aa10.46□□□□□ -0.74
TRIM56-201ENST00000306085 LMO1P25800 156 aa10.46□□□□□ -0.74
TRIM56-201ENST00000306085 ATP5EP56381 51 aaPredicted RBP10.46□□□□□ -0.74
TRIM56-201ENST00000306085 NOTCH4Q99466 2003 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 GP9P14770 177 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 K7EM74 188 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 TDRG1Q3Y452 100 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 C9orf85Q96MD7 179 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 MT-ATP8P03928 68 aa10.45□□□□□ -0.74
TRIM56-201ENST00000306085 KIR2DL5BQ8NHK3 375 aa10.44□□□□□ -0.74
TRIM56-201ENST00000306085 TCL1BO95988 128 aa10.44□□□□□ -0.74
TRIM56-201ENST00000306085 TNS1Q9HBL0 1735 aaKnown RBP10.44□□□□□ -0.74
TRIM56-201ENST00000306085 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
TRIM56-201ENST00000306085 SIRPDQ9H106 197 aa10.44□□□□□ -0.74
TRIM56-201ENST00000306085 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
TRIM56-201ENST00000306085 C17orf58Q2M2W7 97 aa10.43□□□□□ -0.74
TRIM56-201ENST00000306085 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
TRIM56-201ENST00000306085 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
TRIM56-201ENST00000306085 J3QLI3 93 aa10.43□□□□□ -0.74
TRIM56-201ENST00000306085 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
TRIM56-201ENST00000306085 A0A087WZ39 114 aa10.42□□□□□ -0.74
TRIM56-201ENST00000306085 CSRP1P21291 193 aaKnown RBP10.42□□□□□ -0.74
TRIM56-201ENST00000306085 VPREB3Q9UKI3 123 aa10.42□□□□□ -0.74
TRIM56-201ENST00000306085 C3orf84H3BNL1 204 aa10.42□□□□□ -0.74
TRIM56-201ENST00000306085 HRCT1Q6UXD1 115 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 Q8N9W7 124 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 Q8N1Y9 231 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 SPINK6Q6UWN8 80 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 DEFB135Q30KP9 77 aa10.41□□□□□ -0.74
TRIM56-201ENST00000306085 NFE4Q86UQ8 179 aa10.4□□□□□ -0.74
TRIM56-201ENST00000306085 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
TRIM56-201ENST00000306085 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
TRIM56-201ENST00000306085 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
TRIM56-201ENST00000306085 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
TRIM56-201ENST00000306085 NDUFA7O95182 113 aa10.4□□□□□ -0.75
TRIM56-201ENST00000306085 IGLV3-19P01714 112 aa10.4□□□□□ -0.75
TRIM56-201ENST00000306085 DIAPH2-AS1Q14236 149 aa10.4□□□□□ -0.75
TRIM56-201ENST00000306085 LRRK2Q5S007 2527 aa10.4□□□□□ -0.75
TRIM56-201ENST00000306085 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.75
TRIM56-201ENST00000306085 RAI1Q7Z5J4 1906 aaPredicted RBP10.39□□□□□ -0.75
TRIM56-201ENST00000306085 Q8N9L7 120 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 HIGD1BQ9P298 99 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 COL18A1P39060 1754 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 IGKV1-17P01599 117 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 FLVCR1-AS1Q8TAF5 88 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 FAM19A1Q7Z5A9 133 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
TRIM56-201ENST00000306085 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 NDUFC1O43677 76 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 MUC6Q6W4X9 2439 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 LRP4O75096 1905 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 SIP14410 1827 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 SLPIP03973 132 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 C14orf177Q52M58 125 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 MIAQ16674 131 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms