RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 HHLA3Q9XRX5 114 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 OR11H12B2RN74 326 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 K7EMI3 77 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 TCTAP57738 103 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 RPL32P62910 135 aaKnown RBP4.76□□□□□ -1.65
USP47-201ENST00000305481 HERV-K104P63124 156 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 LINC00467Q9BRT7 94 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 TRBV6-5A0A0K0K1A5 114 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 ATP5LO75964 103 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 AZU1P20160 251 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 OCIAD2Q56VL3 154 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 C1orf158Q8N1D5 194 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 LINC01587Q99440 93 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 WFDC10AQ9H1F0 79 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 C19orf73Q9NVV2 129 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 TRBV27A0A0K0K1C4 114 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 GIG44P09565 113 aaPredicted RBP4.76□□□□□ -1.65
USP47-201ENST00000305481 COX8AP10176 69 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 FGF6P10767 208 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 ZNF56Q15929 161 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 SLC25A34Q6PIV7 304 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 STHQ8IWL8 128 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 PGPEP1Q9NXJ5 209 aa4.76□□□□□ -1.65
USP47-201ENST00000305481 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 INSP01308 110 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 BEAN1Q3B7T3 259 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 Q6ZSN1 163 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 BOD1L2Q8IYS8 172 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 MRPL35Q9NZE8 188 aaKnown RBP4.75□□□□□ -1.65
USP47-201ENST00000305481 IGHV3-73A0A0B4J1V6 119 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.75□□□□□ -1.65
USP47-201ENST00000305481 M0R2P5 195 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 ZFP2Q6ZN57 461 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 NDUFA11Q86Y39 141 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 Q9UF83 564 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 NACAE9PAV3 2078 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 A0A087WX48 190 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 A4D1N5 150 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 VCYO14598 125 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 TSHBP01222 138 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 HINT1P49773 126 aaPredicted RBP4.75□□□□□ -1.65
USP47-201ENST00000305481 C2orf91Q6ZV80 131 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 SPATA3Q8NHX4 192 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 PTH2Q96A98 100 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 SCGB3A1Q96QR1 104 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 CST9LQ9H4G1 147 aa4.75□□□□□ -1.65
USP47-201ENST00000305481 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 P0DMU3 169 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 FAM231AP0DMU4 169 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 FAM231CP0DMU5 169 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 ZNF415Q09FC8 603 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 IGKCP01834 107 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 RPL39P62891 51 aaKnown RBP4.74□□□□□ -1.65
USP47-201ENST00000305481 CFAP126Q5VTH2 177 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 LINC00482Q8N8I6 264 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 TRAV12-1A0A0B4J245 112 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 IGIPA6NJ69 53 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 SIVA1O15304 175 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 DPM2O94777 84 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 PIK3CD-AS1Q5SR53 167 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 BAALCQ8WXS3 180 aa4.74□□□□□ -1.65
USP47-201ENST00000305481 MRPL16Q9NX20 251 aaKnown RBP4.74□□□□□ -1.65
USP47-201ENST00000305481 TRRAPQ9Y4A5 3859 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 MPV17L2Q567V2 206 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 IL17DQ8TAD2 202 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 FAM110AQ9BQ89 295 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 EDA2RQ9HAV5 297 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 TP53TG1Q9Y2A0 90 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 FLNBO75369 2602 aaKnown RBP4.73□□□□□ -1.65
USP47-201ENST00000305481 NOTCH3Q9UM47 2321 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 A8MWV9 139 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 H7C1H1 209 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 CRLF1O75462 422 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 COL5A1-AS1Q5SY13 56 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 GTSCR1Q86UQ5 136 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 SPXQ9BT56 116 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 CYSLTR1Q9Y271 337 aa4.73□□□□□ -1.65
USP47-201ENST00000305481 PRSS29PA6NIE9 313 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 NMUP48645 174 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 CMC4P56277 68 aaPredicted RBP4.72□□□□□ -1.65
USP47-201ENST00000305481 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 OR4C5Q8NGB2 326 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 ATRQ13535 2644 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 F8VRH5 84 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 RPL35AP18077 110 aaKnown RBP4.72□□□□□ -1.65
USP47-201ENST00000305481 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
USP47-201ENST00000305481 I3L3M4 83 aa4.71□□□□□ -1.65
USP47-201ENST00000305481 RS1O15537 224 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms