RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 Q6ZSN1 163 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
CCDC7-202ENST00000302316 TRBV6-5A0A0K0K1A5 114 aa9.27□□□□□ -0.93
CCDC7-202ENST00000302316 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
CCDC7-202ENST00000302316 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
CCDC7-202ENST00000302316 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 DEFB4AO15263 64 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 TCAPO15273 167 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 P0DMU3 169 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 NEGR1Q7Z3B1 354 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 Q8NAQ8 132 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 HBDP02042 147 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
CCDC7-202ENST00000302316 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
CCDC7-202ENST00000302316 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
CCDC7-202ENST00000302316 A0A096LNJ9 63 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
CCDC7-202ENST00000302316 LAGE3Q14657 143 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 RETNQ9HD89 108 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 TP53TG1Q9Y2A0 90 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 NBEAL1Q6ZS30 2694 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 SMIM6P0DI80 62 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 KRTDAPP60985 99 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 LINC00612Q8N6U2 182 aa9.25□□□□□ -0.93
CCDC7-202ENST00000302316 VCYO14598 125 aa9.24□□□□□ -0.93
CCDC7-202ENST00000302316 CIDEAO60543 219 aa9.24□□□□□ -0.93
CCDC7-202ENST00000302316 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
CCDC7-202ENST00000302316 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 K7EIL1 84 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 K7EMI3 77 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 K7EQD1 137 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 ORMDL2Q53FV1 153 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 KIR2DL4Q99706 377 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 DKK2Q9UBU2 259 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 TRGV4A0A0C4DH28 118 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 NUDT3O95989 172 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 BTF3P20290 206 aaKnown RBP9.23□□□□□ -0.93
CCDC7-202ENST00000302316 FCER1GP30273 86 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 LINC00173Q6ZV60 143 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 DEFB104AQ8WTQ1 72 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 Q9UF83 564 aa9.23□□□□□ -0.93
CCDC7-202ENST00000302316 C3orf79P0CE67 100 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
CCDC7-202ENST00000302316 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 SLC25A29Q8N8R3 303 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 DNAJC30Q96LL9 226 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 C12orf57Q99622 126 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 CELA1Q9UNI1 258 aa9.22□□□□□ -0.93
CCDC7-202ENST00000302316 I3L3M4 83 aa9.21□□□□□ -0.94
CCDC7-202ENST00000302316 SCGB1D1O95968 90 aa9.21□□□□□ -0.94
CCDC7-202ENST00000302316 DEFB121Q5J5C9 76 aa9.21□□□□□ -0.94
CCDC7-202ENST00000302316 TRBV10-1A0A0K0K1A3 114 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 DAD1P61803 113 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 TRBV6-4A0A1B0GX49 114 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 SPART-AS1P0CW21 52 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
CCDC7-202ENST00000302316 FHL2Q14192 279 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 SBSPONQ8IVN8 264 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
CCDC7-202ENST00000302316 MAP1LC3CQ9BXW4 147 aa9.2□□□□□ -0.94
CCDC7-202ENST00000302316 RHOHQ15669 191 aa9.19□□□□□ -0.94
CCDC7-202ENST00000302316 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
CCDC7-202ENST00000302316 TRBV7-3A0A075B6L6 115 aa9.19□□□□□ -0.94
CCDC7-202ENST00000302316 TSHBP01222 138 aa9.19□□□□□ -0.94
CCDC7-202ENST00000302316 CDPF1Q6NVV7 123 aa9.19□□□□□ -0.94
CCDC7-202ENST00000302316 PHLDA1Q8WV24 401 aaPredicted RBP9.19□□□□□ -0.94
CCDC7-202ENST00000302316 TEX48A0A1B0GUV7 120 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 GAGE12JA6NER3 117 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 H0Y8G0 127 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 SYS1-DBNDD2H3BUS1 97 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 GAGE1Q13065 139 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 GAGE4Q13068 117 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 GAGE5Q13069 117 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 GAGE13Q4V321 117 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
CCDC7-202ENST00000302316 IGHV3-38A0A0C4DH36 116 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 MRAPQ8TCY5 172 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 TOMM6Q96B49 74 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 G0S2P27469 103 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 C11orf68Q9H3H3 251 aaKnown RBP9.17□□□□□ -0.94
CCDC7-202ENST00000302316 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
CCDC7-202ENST00000302316 LOC100131303A0A0U1RQF7 123 aa9.16□□□□□ -0.94
CCDC7-202ENST00000302316 Q8N976 141 aa9.16□□□□□ -0.94
CCDC7-202ENST00000302316 ATP5LO75964 103 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms