RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TRBV30A0A0K0K1B3 111 aa9.71□□□□□ -0.86
TVP23A-201ENST00000299866 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.86
TVP23A-201ENST00000299866 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.86
TVP23A-201ENST00000299866 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
TVP23A-201ENST00000299866 SOCS3O14543 225 aa9.7□□□□□ -0.86
TVP23A-201ENST00000299866 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
TVP23A-201ENST00000299866 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
TVP23A-201ENST00000299866 TLN1Q9Y490 2541 aaKnown RBP9.69□□□□□ -0.86
TVP23A-201ENST00000299866 IGHV3OR16-10A0A075B7F0 116 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 COL6A6A6NMZ7 2263 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 TRAV41A0A0B4J266 112 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 NXPH4O95158 308 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 COX6CP09669 75 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 A8MZ25 164 aa9.69□□□□□ -0.86
TVP23A-201ENST00000299866 BSNQ9UPA5 3926 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 TTC28Q96AY4 2481 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 PRRC2AP48634 2157 aaKnown RBP9.68□□□□□ -0.86
TVP23A-201ENST00000299866 IGHV1-69P01742 117 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 SIRPDQ9H106 197 aa9.68□□□□□ -0.86
TVP23A-201ENST00000299866 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
TVP23A-201ENST00000299866 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
TVP23A-201ENST00000299866 IGLV4-3A0A075B6K6 122 aa9.67□□□□□ -0.86
TVP23A-201ENST00000299866 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
TVP23A-201ENST00000299866 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
TVP23A-201ENST00000299866 M0QY20 66 aa9.67□□□□□ -0.86
TVP23A-201ENST00000299866 C5orf56Q8N8D9 126 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 EDN2P20800 178 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 DAND5Q8N907 189 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 CD28P10747 220 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 RHOHQ15669 191 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 LITAFQ99732 161 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
TVP23A-201ENST00000299866 SPTAN1Q13813 2472 aaKnown RBP9.65□□□□□ -0.86
TVP23A-201ENST00000299866 SORL1Q92673 2214 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 H3BT86 120 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 I3L3M4 83 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 NDUFA4O00483 81 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 NSUN5P1Q3KNT7 163 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 IGF2-ASQ6U949 168 aa9.65□□□□□ -0.86
TVP23A-201ENST00000299866 BRI3O95415 125 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 UBTD1Q9HAC8 227 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 A0A0J9YX75 114 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 KLLNB2CW77 178 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
TVP23A-201ENST00000299866 PF4V1P10720 104 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 CDSNQ15517 529 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 LST1O00453 97 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 CCL21O00585 134 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
TVP23A-201ENST00000299866 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 NPFFO15130 113 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
TVP23A-201ENST00000299866 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 HTN1P15515 57 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 LY6EQ16553 131 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 MIAQ16674 131 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 LINC01587Q99440 93 aa9.62□□□□□ -0.87
TVP23A-201ENST00000299866 IGHV1-58A0A0C4DH39 117 aa9.61□□□□□ -0.87
TVP23A-201ENST00000299866 ZFHX2Q9C0A1 2572 aaPredicted RBP9.6□□□□□ -0.87
TVP23A-201ENST00000299866 HRNRQ86YZ3 2850 aaPredicted RBP9.6□□□□□ -0.87
TVP23A-201ENST00000299866 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 MOB4Q9Y3A3 225 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 TMEM95Q3KNT9 176 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 PROK1P58294 105 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 C11orf71Q6IPW1 123 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
TVP23A-201ENST00000299866 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
TVP23A-201ENST00000299866 ID1P41134 155 aa9.59□□□□□ -0.87
TVP23A-201ENST00000299866 TRBV7-7A0A0K0K1E9 115 aa9.59□□□□□ -0.87
TVP23A-201ENST00000299866 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
TVP23A-201ENST00000299866 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
TVP23A-201ENST00000299866 ZNF625Q96I27 306 aaPredicted RBP9.58□□□□□ -0.88
TVP23A-201ENST00000299866 ZFHX3Q15911 3703 aa9.58□□□□□ -0.88
TVP23A-201ENST00000299866 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
TVP23A-201ENST00000299866 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
TVP23A-201ENST00000299866 DAZ1Q9NQZ3 744 aaKnown RBP9.58□□□□□ -0.88
TVP23A-201ENST00000299866 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms