RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 CD7P09564 240 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 ANKRD17O75179 2603 aaKnown RBP10.12□□□□□ -0.79
CTDP1-202ENST00000299543 IGHV3-64A0A075B6Q5 118 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 H7C1H1 209 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 ZNF56Q15929 161 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 VPREB3Q9UKI3 123 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 CCDC168Q8NDH2 2452 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 AVPP01185 164 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
CTDP1-202ENST00000299543 USMG5Q96IX5 58 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 DAZ1Q9NQZ3 744 aaKnown RBP10.1□□□□□ -0.79
CTDP1-202ENST00000299543 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 TEX49A0A1B0GTD5 131 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 F8VRH5 84 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 IGHG2P01859 326 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
CTDP1-202ENST00000299543 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
CTDP1-202ENST00000299543 TRAV8-4A0A0B4J246 113 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 RHODO00212 210 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 ZNF256Q9Y2P7 627 aaPredicted RBP10.09□□□□□ -0.79
CTDP1-202ENST00000299543 MUC4Q99102 2169 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 MSMBP08118 114 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 PLNP26678 52 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 C10orf105Q8TEF2 133 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 IGSF10Q6WRI0 2623 aa10.09□□□□□ -0.79
CTDP1-202ENST00000299543 DUSP14O95147 198 aaKnown RBP10.09□□□□□ -0.79
CTDP1-202ENST00000299543 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
CTDP1-202ENST00000299543 ZNF462Q96JM2 2506 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 PRSS2P07478 247 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 IGHV4-59P01825 116 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 HERVK_113P61574 105 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 LENEPQ9Y5L5 61 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
CTDP1-202ENST00000299543 TAL2Q16559 108 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
CTDP1-202ENST00000299543 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
CTDP1-202ENST00000299543 A6NDX4 124 aa10.07□□□□□ -0.8
CTDP1-202ENST00000299543 SOCS3O14543 225 aa10.07□□□□□ -0.8
CTDP1-202ENST00000299543 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
CTDP1-202ENST00000299543 BAALCQ8WXS3 180 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 ELANEP08246 267 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 NPC2P61916 151 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
CTDP1-202ENST00000299543 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 SPINK13Q1W4C9 94 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 VCX2Q9H322 139 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 Q8N1Y9 231 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
CTDP1-202ENST00000299543 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 DUX3Q96PT4 197 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
CTDP1-202ENST00000299543 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
CTDP1-202ENST00000299543 NEXN-AS1Q8NBZ9 246 aa10.04□□□□□ -0.8
CTDP1-202ENST00000299543 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
CTDP1-202ENST00000299543 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 UBE2D3P61077 147 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 UBE2D2P62837 147 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 SUMO4Q6EEV6 95 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 PRORYQ9H606 182 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 IGHV3-73A0A0B4J1V6 119 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 B4DSR2 109 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 C9orf153Q5TBE3 101 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
CTDP1-202ENST00000299543 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
CTDP1-202ENST00000299543 RS1O15537 224 aa10.02□□□□□ -0.81
CTDP1-202ENST00000299543 TEX15Q9BXT5 2789 aa10.02□□□□□ -0.81
CTDP1-202ENST00000299543 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
CTDP1-202ENST00000299543 ODF3Q96PU9 254 aa10.02□□□□□ -0.81
CTDP1-202ENST00000299543 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 UBE2D1P51668 147 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 SNRPD3P62318 126 aaKnown RBP10.01□□□□□ -0.81
CTDP1-202ENST00000299543 KHDC1LQ5JSQ8 128 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 IGLV1-40P01703 118 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 PRM2P04554 102 aa10.01□□□□□ -0.81
CTDP1-202ENST00000299543 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 CFC1BP0CG36 223 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 CFC1P0CG37 223 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 DCANP1Q8TF63 244 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 A4D1N5 150 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 RNF223E7ERA6 249 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 H3BUA1 57 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 VCYO14598 125 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 PPP1R17O96001 155 aa10□□□□□ -0.81
CTDP1-202ENST00000299543 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms