RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 H7C1H1 209 aa17.43■□□□□ 0.38
GTF2A1-201ENST00000298173 IFI27P40305 119 aaPredicted RBP17.43■□□□□ 0.38
GTF2A1-201ENST00000298173 FHL2Q14192 279 aa17.43■□□□□ 0.38
GTF2A1-201ENST00000298173 HUWE1Q7Z6Z7 4374 aaKnown RBP17.43■□□□□ 0.38
GTF2A1-201ENST00000298173 IGLV2-18A0A075B6J9 118 aa17.42■□□□□ 0.38
GTF2A1-201ENST00000298173 LINC00614P0C842 121 aa17.42■□□□□ 0.38
GTF2A1-201ENST00000298173 SUMO2P61956 95 aaKnown RBP17.42■□□□□ 0.38
GTF2A1-201ENST00000298173 Q9UF83 564 aa17.42■□□□□ 0.38
GTF2A1-201ENST00000298173 PRSS3P2Q8NHM4 247 aa17.42■□□□□ 0.38
GTF2A1-201ENST00000298173 TEX48A0A1B0GUV7 120 aa17.41■□□□□ 0.38
GTF2A1-201ENST00000298173 P0DMU3 169 aa17.41■□□□□ 0.38
GTF2A1-201ENST00000298173 FAM231AP0DMU4 169 aa17.41■□□□□ 0.38
GTF2A1-201ENST00000298173 FAM231CP0DMU5 169 aa17.41■□□□□ 0.38
GTF2A1-201ENST00000298173 POLR2KP53803 58 aaKnown RBP17.41■□□□□ 0.38
GTF2A1-201ENST00000298173 DAD1P61803 113 aa17.4■□□□□ 0.38
GTF2A1-201ENST00000298173 RPL32P62910 135 aaKnown RBP17.4■□□□□ 0.38
GTF2A1-201ENST00000298173 HIST3H2BBQ8N257 126 aa17.4■□□□□ 0.38
GTF2A1-201ENST00000298173 B9D2Q9BPU9 175 aa17.4■□□□□ 0.38
GTF2A1-201ENST00000298173 LINC01546A6NGU7 62 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 Q8N8P6 123 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 SLC25A29Q8N8R3 303 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 CHCHD1Q96BP2 118 aaKnown RBP17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 ST20Q9HBF5 79 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 NXT2Q9NPJ8 142 aaKnown RBP17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 DNAH9Q9NYC9 4486 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 TRBV6-4A0A1B0GX49 114 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 SMIM2Q9BVW6 85 aa17.39■□□□□ 0.37
GTF2A1-201ENST00000298173 NEXN-AS1Q8NBZ9 246 aa17.38■□□□□ 0.37
GTF2A1-201ENST00000298173 TMEM70Q9BUB7 260 aa17.38■□□□□ 0.37
GTF2A1-201ENST00000298173 TRGV4A0A0C4DH28 118 aa17.37■□□□□ 0.37
GTF2A1-201ENST00000298173 A0A0J9YWU9 116 aa17.37■□□□□ 0.37
GTF2A1-201ENST00000298173 RNASEKQ6P5S7 137 aaKnown RBP17.37■□□□□ 0.37
GTF2A1-201ENST00000298173 DNAJC30Q96LL9 226 aa17.37■□□□□ 0.37
GTF2A1-201ENST00000298173 TRBV10-1A0A0K0K1A3 114 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 SDHAF1A6NFY7 115 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 IFITM10A6NMD0 228 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 K7EQD1 137 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 C12orf74Q32Q52 190 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 ZMAT4Q9H898 229 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 PDZD11Q5EBL8 140 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 FA2HQ7L5A8 372 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 AP5S1Q9NUS5 200 aa17.36■□□□□ 0.37
GTF2A1-201ENST00000298173 TRBV27A0A0K0K1C4 114 aa17.35■□□□□ 0.37
GTF2A1-201ENST00000298173 PMCHP20382 165 aa17.35■□□□□ 0.37
GTF2A1-201ENST00000298173 VCYO14598 125 aa17.34■□□□□ 0.37
GTF2A1-201ENST00000298173 DEFA6Q01524 100 aa17.34■□□□□ 0.37
GTF2A1-201ENST00000298173 HHLA3Q9XRX5 114 aa17.34■□□□□ 0.37
GTF2A1-201ENST00000298173 LOC105371267A0A1B0GV96 52 aa17.33■□□□□ 0.37
GTF2A1-201ENST00000298173 HSBP1O75506 76 aa17.33■□□□□ 0.37
GTF2A1-201ENST00000298173 ATP5G1P05496 136 aa17.33■□□□□ 0.37
GTF2A1-201ENST00000298173 TNFRSF18Q9Y5U5 241 aa17.33■□□□□ 0.37
GTF2A1-201ENST00000298173 FAM19A2Q8N3H0 131 aa17.32■□□□□ 0.36
GTF2A1-201ENST00000298173 TRBV7-3A0A075B6L6 115 aa17.31■□□□□ 0.36
GTF2A1-201ENST00000298173 CRYBA4P53673 196 aa17.31■□□□□ 0.36
GTF2A1-201ENST00000298173 RHOHQ15669 191 aa17.31■□□□□ 0.36
GTF2A1-201ENST00000298173 HIST1H2BLQ99880 126 aa17.31■□□□□ 0.36
GTF2A1-201ENST00000298173 PRO0255Q9UI72 69 aa17.31■□□□□ 0.36
GTF2A1-201ENST00000298173 K7EMI3 77 aa17.3■□□□□ 0.36
GTF2A1-201ENST00000298173 NEGR1Q7Z3B1 354 aa17.3■□□□□ 0.36
GTF2A1-201ENST00000298173 PACRGQ96M98 296 aaPredicted RBP17.3■□□□□ 0.36
GTF2A1-201ENST00000298173 TCAPO15273 167 aa17.29■□□□□ 0.36
GTF2A1-201ENST00000298173 S100A2P29034 98 aa17.29■□□□□ 0.36
GTF2A1-201ENST00000298173 ZNRF2Q8NHG8 242 aa17.29■□□□□ 0.36
GTF2A1-201ENST00000298173 A0A096LNJ9 63 aa17.29■□□□□ 0.36
GTF2A1-201ENST00000298173 IGHV1-24A0A0C4DH33 117 aa17.29■□□□□ 0.36
GTF2A1-201ENST00000298173 I3L3M4 83 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 AMTP48728 403 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 RPL36AP83881 106 aaKnown RBP17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 LAGE3Q14657 143 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 PMCHL1Q16048 86 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 C11orf45Q8TAV5 145 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 RPL36ALQ969Q0 106 aaKnown RBP17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 TMEM18Q96B42 140 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 PRADC1Q9BSG0 188 aa17.28■□□□□ 0.36
GTF2A1-201ENST00000298173 LOC100131303A0A0U1RQF7 123 aa17.27■□□□□ 0.36
GTF2A1-201ENST00000298173 NHLRC4P0CG21 123 aaPredicted RBP17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 UBE2D3P61077 147 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 UBE2D2P62837 147 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 VSIG2Q96IQ7 327 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 KIR2DL4Q99706 377 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 LINC00694P0DN24 101 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 FABP4P15090 132 aa17.26■□□□□ 0.35
GTF2A1-201ENST00000298173 GAGE12JA6NER3 117 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 F5H768 121 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 TSHBP01222 138 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 GAGE1Q13065 139 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 GAGE4Q13068 117 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 GAGE5Q13069 117 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 GAGE13Q4V321 117 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 Q6ZTC4 211 aa17.25■□□□□ 0.35
GTF2A1-201ENST00000298173 PRKDCP78527 4128 aaKnown RBP17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 FCER1GP30273 86 aa17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 NANOS2P60321 138 aaKnown RBP17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 ORMDL2Q53FV1 153 aa17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 MEGF8Q7Z7M0 2845 aa17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 COL7A1Q02388 2944 aa17.24■□□□□ 0.35
GTF2A1-201ENST00000298173 PAX4O43316 350 aa17.23■□□□□ 0.35
GTF2A1-201ENST00000298173 DAZ4Q86SG3 579 aaKnown RBP17.23■□□□□ 0.35
GTF2A1-201ENST00000298173 DEFB104AQ8WTQ1 72 aa17.23■□□□□ 0.35
GTF2A1-201ENST00000298173 DAZ3Q9NR90 486 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms