RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 H7C1H1 209 aa8.64□□□□□ -1.03
RHO-201ENST00000296271 HSD52Q0P140 79 aa8.64□□□□□ -1.03
RHO-201ENST00000296271 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
RHO-201ENST00000296271 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
RHO-201ENST00000296271 VWFP04275 2813 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
RHO-201ENST00000296271 KRTAP1-1Q07627 177 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 MAP6D1Q9H9H5 199 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 Q6ZSN1 163 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 OR4C5Q8NGB2 326 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 ODF3Q96PU9 254 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 SMR3AQ99954 134 aa8.63□□□□□ -1.03
RHO-201ENST00000296271 HLA-DRB4P13762 266 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 DYNLRB2Q8TF09 96 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 HLA-DRB4X5D2U9 266 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
RHO-201ENST00000296271 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 SEC11AP67812 179 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 CYSLTR1Q9Y271 337 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 SIVA1O15304 175 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 PLNP26678 52 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
RHO-201ENST00000296271 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
RHO-201ENST00000296271 VCYO14598 125 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 AZU1P20160 251 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 CEMP1Q6PRD7 247 aaPredicted RBP8.6□□□□□ -1.03
RHO-201ENST00000296271 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
RHO-201ENST00000296271 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 PRADC1Q9BSG0 188 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
RHO-201ENST00000296271 NHP2Q9NX24 153 aaKnown RBP8.6□□□□□ -1.03
RHO-201ENST00000296271 HIVEP2P31629 2446 aa8.59□□□□□ -1.03
RHO-201ENST00000296271 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
RHO-201ENST00000296271 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
RHO-201ENST00000296271 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
RHO-201ENST00000296271 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
RHO-201ENST00000296271 PEMTQ9UBM1 199 aa8.59□□□□□ -1.03
RHO-201ENST00000296271 C9orf118A6NHY6 69 aa8.59□□□□□ -1.03
RHO-201ENST00000296271 A6NDN8 102 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 H3BRM9 83 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 LINC01587Q99440 93 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 PPP1R17O96001 155 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
RHO-201ENST00000296271 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 CEND1Q8N111 149 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 TRGV11A0A075B6L2 103 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 CCL24O00175 119 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 LINC01006Q8NI28 216 aa8.57□□□□□ -1.04
RHO-201ENST00000296271 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
RHO-201ENST00000296271 PHLDA1Q8WV24 401 aaPredicted RBP8.56□□□□□ -1.04
RHO-201ENST00000296271 HIST1H4GQ99525 98 aa8.56□□□□□ -1.04
RHO-201ENST00000296271 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
RHO-201ENST00000296271 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
RHO-201ENST00000296271 TRPT1Q86TN4 253 aaKnown RBP8.56□□□□□ -1.04
RHO-201ENST00000296271 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
RHO-201ENST00000296271 A8MTW9 85 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 RIPPLY3P57055 190 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 PMVKQ15126 192 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 FAM104AQ969W3 186 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 E9PLD3 99 aa8.55□□□□□ -1.04
RHO-201ENST00000296271 RPL32P62910 135 aaKnown RBP8.55□□□□□ -1.04
RHO-201ENST00000296271 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 TM2D2Q9BX73 214 aa8.54□□□□□ -1.04
RHO-201ENST00000296271 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 I3L3M4 83 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 M0R2P5 195 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 FHL3Q13643 280 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 CIDEAO60543 219 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 SAMD5Q5TGI4 173 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 TMEM86BQ8N661 226 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms