RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 GAGE5Q13069 117 aa11.07□□□□□ -0.64
MRPL55-201ENST00000295008 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
MRPL55-201ENST00000295008 C15orf53Q8NAA6 179 aa11.07□□□□□ -0.64
MRPL55-201ENST00000295008 RPL39LQ96EH5 51 aaKnown RBP11.07□□□□□ -0.64
MRPL55-201ENST00000295008 A0A096LPF7 62 aa11.06□□□□□ -0.64
MRPL55-201ENST00000295008 COLCA2A8K830 154 aa11.06□□□□□ -0.64
MRPL55-201ENST00000295008 D6R8Y8 96 aa11.06□□□□□ -0.64
MRPL55-201ENST00000295008 APCSP02743 223 aa11.06□□□□□ -0.64
MRPL55-201ENST00000295008 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
MRPL55-201ENST00000295008 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
MRPL55-201ENST00000295008 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
MRPL55-201ENST00000295008 C3orf84H3BNL1 204 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 CKS2P33552 79 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
MRPL55-201ENST00000295008 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
MRPL55-201ENST00000295008 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 NRACQ8N912 160 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
MRPL55-201ENST00000295008 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
MRPL55-201ENST00000295008 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 PPBPP02775 128 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 SRIP30626 198 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 CASC10Q5T4H9 136 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 ORMDL3Q8N138 153 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 APLNQ9ULZ1 77 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 TNFRSF18Q9Y5U5 241 aa11.04□□□□□ -0.64
MRPL55-201ENST00000295008 UBE2D3P61077 147 aa11.03□□□□□ -0.64
MRPL55-201ENST00000295008 UBE2D2P62837 147 aa11.03□□□□□ -0.64
MRPL55-201ENST00000295008 DNAH7Q8WXX0 4024 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 NPYP01303 97 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 RAB5AP20339 215 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 FABP9Q0Z7S8 132 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
MRPL55-201ENST00000295008 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 PPP1R17O96001 155 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 TCTAP57738 103 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 NEGR1Q7Z3B1 354 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
MRPL55-201ENST00000295008 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
MRPL55-201ENST00000295008 ST20Q9HBF5 79 aa11□□□□□ -0.65
MRPL55-201ENST00000295008 SDHAF1A6NFY7 115 aa10.99□□□□□ -0.65
MRPL55-201ENST00000295008 PHOX2AO14813 284 aa10.99□□□□□ -0.65
MRPL55-201ENST00000295008 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
MRPL55-201ENST00000295008 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
MRPL55-201ENST00000295008 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
MRPL55-201ENST00000295008 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
MRPL55-201ENST00000295008 C20orf78Q9BR46 151 aa10.98□□□□□ -0.65
MRPL55-201ENST00000295008 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
MRPL55-201ENST00000295008 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
MRPL55-201ENST00000295008 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
MRPL55-201ENST00000295008 CSMD3Q7Z407 3707 aa10.97□□□□□ -0.65
MRPL55-201ENST00000295008 TRGC2P03986 189 aa10.97□□□□□ -0.65
MRPL55-201ENST00000295008 ESRGQ1W209 222 aa10.97□□□□□ -0.65
MRPL55-201ENST00000295008 LYPD5Q6UWN5 251 aa10.97□□□□□ -0.65
MRPL55-201ENST00000295008 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-201ENST00000295008 GTSF1LQ9H1H1 148 aa10.97□□□□□ -0.65
MRPL55-201ENST00000295008 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
MRPL55-201ENST00000295008 DEFB104AQ8WTQ1 72 aa10.96□□□□□ -0.65
MRPL55-201ENST00000295008 SMIM2Q9BVW6 85 aa10.96□□□□□ -0.65
MRPL55-201ENST00000295008 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.65
MRPL55-201ENST00000295008 STARD9Q9P2P6 4700 aa10.96□□□□□ -0.66
MRPL55-201ENST00000295008 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
MRPL55-201ENST00000295008 TIRAPP58753 221 aa10.95□□□□□ -0.66
MRPL55-201ENST00000295008 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
MRPL55-201ENST00000295008 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 LOC389332A0A1B0GUA5 103 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 I3L3M4 83 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 PMCHP20382 165 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 CCL18P55774 89 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 COTL1Q14019 142 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
MRPL55-201ENST00000295008 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
MRPL55-201ENST00000295008 VCYO14598 125 aa10.93□□□□□ -0.66
MRPL55-201ENST00000295008 TSHBP01222 138 aa10.93□□□□□ -0.66
MRPL55-201ENST00000295008 IQCJQ1A5X6 159 aa10.93□□□□□ -0.66
MRPL55-201ENST00000295008 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
MRPL55-201ENST00000295008 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
MRPL55-201ENST00000295008 IGLV2-18A0A075B6J9 118 aa10.92□□□□□ -0.66
MRPL55-201ENST00000295008 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
MRPL55-201ENST00000295008 TMEM97Q5BJF2 176 aa10.92□□□□□ -0.66
MRPL55-201ENST00000295008 LELP1Q5T871 98 aa10.92□□□□□ -0.66
MRPL55-201ENST00000295008 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
MRPL55-201ENST00000295008 AMTP48728 403 aa10.91□□□□□ -0.66
MRPL55-201ENST00000295008 Q8N8P6 123 aa10.91□□□□□ -0.66
MRPL55-201ENST00000295008 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
MRPL55-201ENST00000295008 KIR2DL4Q99706 377 aa10.91□□□□□ -0.66
MRPL55-201ENST00000295008 RYR3Q15413 4870 aa10.9□□□□□ -0.66
MRPL55-201ENST00000295008 IGHV1-24A0A0C4DH33 117 aa10.9□□□□□ -0.66
MRPL55-201ENST00000295008 FCER1GP30273 86 aa10.9□□□□□ -0.66
MRPL55-201ENST00000295008 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
MRPL55-201ENST00000295008 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
MRPL55-201ENST00000295008 TCAPO15273 167 aa10.89□□□□□ -0.67
MRPL55-201ENST00000295008 NXT2Q9NPJ8 142 aaKnown RBP10.89□□□□□ -0.67
MRPL55-201ENST00000295008 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms